Probab=100.00 E-value=0 Score=541.73 Aligned_cols=231 Identities=44% Similarity=0.804 Sum_probs=217.7
Q ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCH
Q ss_conf 88876433322111111101101202686545666544611114648799999999998643111234772001023202
Q gi|254781170|r 208 FPIGEQNALHILRKFCKEKVYYYVEQRDIPAIQGTSQLSPYLSIGVLSPRQCWNRLKEEFVDLLIKPKSGAFSWLNELIW 287 (483)
Q Consensus 208 ~~gGe~~A~~~L~~Fl~~~l~~Y~~~Rn~p~~~~tSrLSPyL~~G~IS~R~v~~~~~~~~~~~~~~~~~~~~~fl~eL~W 287 (483)
.++||++|+++|++|+++++.+|+++||.|+.++||+|||||+||+||||+|++++... .+++.++|++||+|
T Consensus 4 p~pGe~~Al~~L~~Fl~~~l~~Y~~~Rn~p~~~~tS~LSPyL~~G~LS~r~v~~~~~~~-------~~~~~~~~~~el~w 76 (234)
T d2j07a1 4 PEPGEEAALAGLRAFLEAKLPRYAEERDRLDGEGGSRLSPYFALGVLSPRLAAWEAERR-------GGEGARKWVAELLW 76 (234)
T ss_dssp CCCSHHHHHHHHHHHHHHTGGGHHHHTTCTTCTTSCCCHHHHHTTSSCHHHHHHHHHHH-------CSHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHH-------CCHHHHHHHHHHHH
T ss_conf 98449999999999999787787675688888787546898806878599999998642-------00036788999999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCHHHHCCCHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
Q ss_conf 46888788863357888615301101200010467899872278886889999999971676358999999999984104
Q gi|254781170|r 288 REFYRHLMAFYPSVCMGKPFIPWTEKIEWNKDSHLLQAWKQGYTGFPIIDAAMRQLNTIGWMHNRLRMITASFLVKDLLV 367 (483)
Q Consensus 288 Ref~~~~~~~~P~~~~~~~~~~~~~~~~w~~~~~~~~aW~~G~TG~PlVDA~MR~L~~tG~mhnr~Rm~vaSfl~~~L~i 367 (483)
|||+++.++++|.+.. .+..+.++...|..+++.+++|++|+||+|+||||||||++|||||||+|||+|||+++.|++
T Consensus 77 r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~Tg~~~~da~mr~L~~tG~~Hn~~Rm~~a~~~~~~l~~ 155 (234)
T d2j07a1 77 RDFSYHLLYHFPWMAE-RPLDPRFQAFPWQEDEALFQAWYEGKTGVPLVDAAMRELHATGFLSNRARMNAAQFAVKHLLL 155 (234)
T ss_dssp HHHHHHHHHHCGGGGT-SCSSGGGTTCCCCCCHHHHHHHHTTCSSCHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHTSCC
T ss_pred HHHHHHHHHHHHHHHH-CCHHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCC
T ss_conf 9999999986434653-211222020000148899998650224863899999998755317489999999999860130
Q ss_pred CHHHHHHHHHHHHHCCCHHCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHCCCCCEEHCCCHHHHCCCHHHHCCHHHHH
Q ss_conf 70022334776641331114745610020127898470220464589887248997833008243279977804955401
Q gi|254781170|r 368 DWRIGEEYFMSQLLDGDLASNNGGWQWAASTGNDSVPYFRIFNPTIQGKRFDPQGTFIRHWLPELNNVPTQYIHAPHSWL 447 (483)
Q Consensus 368 dWr~g~~~f~~~llD~d~~~n~~~wq~~a~~G~d~~~~~Ri~np~~q~~~~Dp~g~~ir~wvPeL~~~p~~~ih~p~~~~ 447 (483)
||+.|+.||+++|||||+++|++||||+||+|+|+.||+|+|||++|++||||+|+|||||||||+++|
T Consensus 156 ~w~~~~~~f~~~liD~d~~~n~~~w~~~ag~g~~~~~~~r~~n~~~~~~k~Dp~g~yi~~w~Pel~~~~----------- 224 (234)
T d2j07a1 156 PWKRCEEAFRHLLLDGDRAVNLQGWQWAGGLGVDAAPYFRVFNPVLQGERHDPEGRWLKRWAPEYPSYA----------- 224 (234)
T ss_dssp CHHHHHHHHHHHCTTCCHHHHHHHHHHHTTSSGGGCCTTCCCCHHHHHHHHSTTSHHHHHHCTTCSSSS-----------
T ss_pred CHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHCCCCCCCC-----------
T ss_conf 389999999999523783211122555515688899724414899999986989628998782110489-----------
Q ss_pred HHCCCCCCCCCCCCCHHH
Q ss_conf 312578999976318999
Q gi|254781170|r 448 DKNDLSLNYPLPIVDHKK 465 (483)
Q Consensus 448 ~~~~~~~~YP~pivd~~~ 465 (483)
|+.||||+++
T Consensus 225 --------~~~~~~d~~~ 234 (234)
T d2j07a1 225 --------PKDPVVDLEE 234 (234)
T ss_dssp --------CSSCSSCHHH
T ss_pred --------CCCCCCCCCC
T ss_conf --------8888879989
class: All alpha proteins
fold: Cryptochrome/photolyase FAD-binding domain
superfamily: Cryptochrome/photolyase FAD-binding domain
family: Cryptochrome/photolyase FAD-binding domain
domain: C-terminal domain of DNA photolyase
species: Thermus thermophilus [TaxId: 274]