PSIBLAST alignment of GI: 254781170 and protein with PDB id: 2ijg
gi|119390180|pdb|2IJG|X Chain X, Crystal Structure Of Cryptochrome 3 From Arabidopsis Thaliana Length = 526
>gi|238828067|pdb|2VTB|A Chain A, Structure Of Cryptochrome 3 - Dna Complex Length = 526
>gi|238828069|pdb|2VTB|C Chain C, Structure Of Cryptochrome 3 - Dna Complex Length = 526
>gi|238828070|pdb|2VTB|D Chain D, Structure Of Cryptochrome 3 - Dna Complex Length = 526
>gi|238828071|pdb|2VTB|E Chain E, Structure Of Cryptochrome 3 - Dna Complex Length = 526
>gi|238828072|pdb|2VTB|F Chain F, Structure Of Cryptochrome 3 - Dna Complex Length = 526
Score = 232 bits (591), Expect = 1e-58, Method: Composition-based stats.
Identities = 118/456 (25%), Positives = 207/456 (45%), Gaps = 25/456 (5%)
Query: 9 VHLVWLRNDLRITDNKALYAACHNSDAKVIAVFIATPEQW------RQHGISARQSHFIY 62
V ++W RNDLR+ DN ALY A +SD ++ V+ P + A + F+
Sbjct: 42 VTILWFRNDLRVLDNDALYKAWSSSDT-ILPVYCLDPRLFHTTHFFNFPKTGALRGGFLM 100
Query: 63 ASLLQVQKSLSQKGIVFQYHQCSNFDDSIEWLDSYCLQQRVTKLFYNRQYEINEVRRDKL 122
L+ ++K+L ++G+ E L S +F +++ EV ++L
Sbjct: 101 ECLVDLRKNLMKRGLNLLIRS----GKPEEILPSLAKDFGARTVFAHKETCSEEVDVERL 156
Query: 123 LEKRLQ---HRVICKSFDDSVLLPPGSILNHALQMYKVYTPFRKALIQNLVQADLRSLPV 179
+ + L+ + + S + + + VYT FRK++ +P+
Sbjct: 157 VNQGLKRVGNSTKLELIWGSTMYHKDDLPFDVFDLPDVYTQFRKSVEAKCSIRSSTRIPL 216
Query: 180 PAIRLTGPVTPSNIPRFFD---YPFQAIDPMFPIGEQNALHILRKFCKEKVY---YYVEQ 233
++P P + M +G ++A K Y E
Sbjct: 217 SLGPTPSVDDWGDVPTLEKLGVEPQEVTRGMRFVGGESAGVGRVFEYFWKKDLLKVYKET 276
Query: 234 RD-IPAIQGTSQLSPYLSIGVLSPRQCWNRLKEEFVDLLIKPKSGAFSWLNELIWREFYR 292
R+ + +++ SP+L+ G +SPR + ++ + + + L ELIWR+++R
Sbjct: 277 RNGMLGPDYSTKFSPWLAFGCISPRFIYEEVQRYEKERVANN--STYWVLFELIWRDYFR 334
Query: 293 HLMAFYPSVCMGKPFIPWTEKIEWNKDSHLLQAWKQGYTGFPIIDAAMRQLNTIGWMHNR 352
L + P + +W++D L ++W+ TG+P+IDA M++L+T G+M NR
Sbjct: 335 FLSIKCGNSLFH-LGGPRNVQGKWSQDQKLFESWRDAKTGYPLIDANMKELSTTGFMSNR 393
Query: 353 LRMITASFLVKDLLVDWRIGEEYFMSQLLDGDLASNNGGWQWAASTGNDSVPYFRIFNPT 412
R I SFLV+D+ +DWR+G E+F + LLD D SN G W + A GND R F+
Sbjct: 394 GRQIVCSFLVRDMGLDWRMGAEWFETCLLDYDPCSNYGNWTYGAGVGNDPRE-DRYFSIP 452
Query: 413 IQGKRFDPQGTFIRHWLPELNNVPTQYIHAPHSWLD 448
Q + +DP+G ++ WL +L +P + H P +
Sbjct: 453 KQAQNYDPEGEYVAFWLQQLRRLPKEKRHWPGRLMY 488