PSIBLAST alignment of GI: 254781170 and protein with PDB id: 2ijg

gi|119390180|pdb|2IJG|X Chain X, Crystal Structure Of Cryptochrome 3 From Arabidopsis Thaliana Length = 526
>gi|238828067|pdb|2VTB|A Chain A, Structure Of Cryptochrome 3 - Dna Complex Length = 526
>gi|238828069|pdb|2VTB|C Chain C, Structure Of Cryptochrome 3 - Dna Complex Length = 526
>gi|238828070|pdb|2VTB|D Chain D, Structure Of Cryptochrome 3 - Dna Complex Length = 526
>gi|238828071|pdb|2VTB|E Chain E, Structure Of Cryptochrome 3 - Dna Complex Length = 526
>gi|238828072|pdb|2VTB|F Chain F, Structure Of Cryptochrome 3 - Dna Complex Length = 526
 Score =  232 bits (591), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 118/456 (25%), Positives = 207/456 (45%), Gaps = 25/456 (5%)

Query: 9   VHLVWLRNDLRITDNKALYAACHNSDAKVIAVFIATPEQW------RQHGISARQSHFIY 62
           V ++W RNDLR+ DN ALY A  +SD  ++ V+   P  +            A +  F+ 
Sbjct: 42  VTILWFRNDLRVLDNDALYKAWSSSDT-ILPVYCLDPRLFHTTHFFNFPKTGALRGGFLM 100

Query: 63  ASLLQVQKSLSQKGIVFQYHQCSNFDDSIEWLDSYCLQQRVTKLFYNRQYEINEVRRDKL 122
             L+ ++K+L ++G+              E L S         +F +++    EV  ++L
Sbjct: 101 ECLVDLRKNLMKRGLNLLIRS----GKPEEILPSLAKDFGARTVFAHKETCSEEVDVERL 156

Query: 123 LEKRLQ---HRVICKSFDDSVLLPPGSILNHALQMYKVYTPFRKALIQNLVQADLRSLPV 179
           + + L+   +    +    S +     +      +  VYT FRK++           +P+
Sbjct: 157 VNQGLKRVGNSTKLELIWGSTMYHKDDLPFDVFDLPDVYTQFRKSVEAKCSIRSSTRIPL 216

Query: 180 PAIRLTGPVTPSNIPRFFD---YPFQAIDPMFPIGEQNALHILRKFCKEKVY---YYVEQ 233
                       ++P        P +    M  +G ++A          K      Y E 
Sbjct: 217 SLGPTPSVDDWGDVPTLEKLGVEPQEVTRGMRFVGGESAGVGRVFEYFWKKDLLKVYKET 276

Query: 234 RD-IPAIQGTSQLSPYLSIGVLSPRQCWNRLKEEFVDLLIKPKSGAFSWLNELIWREFYR 292
           R+ +     +++ SP+L+ G +SPR  +  ++    + +       +  L ELIWR+++R
Sbjct: 277 RNGMLGPDYSTKFSPWLAFGCISPRFIYEEVQRYEKERVANN--STYWVLFELIWRDYFR 334

Query: 293 HLMAFYPSVCMGKPFIPWTEKIEWNKDSHLLQAWKQGYTGFPIIDAAMRQLNTIGWMHNR 352
            L     +        P   + +W++D  L ++W+   TG+P+IDA M++L+T G+M NR
Sbjct: 335 FLSIKCGNSLFH-LGGPRNVQGKWSQDQKLFESWRDAKTGYPLIDANMKELSTTGFMSNR 393

Query: 353 LRMITASFLVKDLLVDWRIGEEYFMSQLLDGDLASNNGGWQWAASTGNDSVPYFRIFNPT 412
            R I  SFLV+D+ +DWR+G E+F + LLD D  SN G W + A  GND     R F+  
Sbjct: 394 GRQIVCSFLVRDMGLDWRMGAEWFETCLLDYDPCSNYGNWTYGAGVGNDPRE-DRYFSIP 452

Query: 413 IQGKRFDPQGTFIRHWLPELNNVPTQYIHAPHSWLD 448
            Q + +DP+G ++  WL +L  +P +  H P   + 
Sbjct: 453 KQAQNYDPEGEYVAFWLQQLRRLPKEKRHWPGRLMY 488