PSIBLAST alignment of GI: 254781170 and protein with PDB id: 2j4d

>gi|150261312|pdb|2J4D|A Chain A, Cryptochrome 3 From Arabidopsis Thaliana Length = 525
>gi|150261313|pdb|2J4D|B Chain B, Cryptochrome 3 From Arabidopsis Thaliana Length = 525
 Score =  232 bits (592), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 118/456 (25%), Positives = 207/456 (45%), Gaps = 25/456 (5%)

Query: 9   VHLVWLRNDLRITDNKALYAACHNSDAKVIAVFIATPEQW------RQHGISARQSHFIY 62
           V ++W RNDLR+ DN ALY A  +SD  ++ V+   P  +            A +  F+ 
Sbjct: 41  VTILWFRNDLRVLDNDALYKAWSSSDT-ILPVYCLDPRLFHTTHFFNFPKTGALRGGFLM 99

Query: 63  ASLLQVQKSLSQKGIVFQYHQCSNFDDSIEWLDSYCLQQRVTKLFYNRQYEINEVRRDKL 122
             L+ ++K+L ++G+              E L S         +F +++    EV  ++L
Sbjct: 100 ECLVDLRKNLMKRGLNLLIRS----GKPEEILPSLAKDFGARTVFAHKETCSEEVDVERL 155

Query: 123 LEKRLQ---HRVICKSFDDSVLLPPGSILNHALQMYKVYTPFRKALIQNLVQADLRSLPV 179
           + + L+   +    +    S +     +      +  VYT FRK++           +P+
Sbjct: 156 VNQGLKRVGNSTKLELIWGSTMYHKDDLPFDVFDLPDVYTQFRKSVEAKCSIRSSTRIPL 215

Query: 180 PAIRLTGPVTPSNIPRFFD---YPFQAIDPMFPIGEQNALHILRKFCKEKVY---YYVEQ 233
                       ++P        P +    M  +G ++A          K      Y E 
Sbjct: 216 SLGPTPSVDDWGDVPTLEKLGVEPQEVTRGMRFVGGESAGVGRVFEYFWKKDLLKVYKET 275

Query: 234 RD-IPAIQGTSQLSPYLSIGVLSPRQCWNRLKEEFVDLLIKPKSGAFSWLNELIWREFYR 292
           R+ +     +++ SP+L+ G +SPR  +  ++    + +       +  L ELIWR+++R
Sbjct: 276 RNGMLGPDYSTKFSPWLAFGCISPRFIYEEVQRYEKERVANN--STYWVLFELIWRDYFR 333

Query: 293 HLMAFYPSVCMGKPFIPWTEKIEWNKDSHLLQAWKQGYTGFPIIDAAMRQLNTIGWMHNR 352
            L     +        P   + +W++D  L ++W+   TG+P+IDA M++L+T G+M NR
Sbjct: 334 FLSIKCGNSLFH-LGGPRNVQGKWSQDQKLFESWRDAKTGYPLIDANMKELSTTGFMSNR 392

Query: 353 LRMITASFLVKDLLVDWRIGEEYFMSQLLDGDLASNNGGWQWAASTGNDSVPYFRIFNPT 412
            R I  SFLV+D+ +DWR+G E+F + LLD D  SN G W + A  GND     R F+  
Sbjct: 393 GRQIVCSFLVRDMGLDWRMGAEWFETCLLDYDPCSNYGNWTYGAGVGNDPRE-DRYFSIP 451

Query: 413 IQGKRFDPQGTFIRHWLPELNNVPTQYIHAPHSWLD 448
            Q + +DP+G ++  WL +L  +P +  H P   + 
Sbjct: 452 KQAQNYDPEGEYVAFWLQQLRRLPKEKRHWPGRLMY 487