RPSBLAST alignment of GI: 254781170 and SCOP domain: d2j07a1

Alignment

 Score =  163 bits (413), Expect = 3e-41
 Identities = 102/260 (39%), Positives = 143/260 (55%), Gaps = 27/260 (10%)

Query: 206 PMFPIGEQNALHILRKFCKEKVYYYVEQRDIPAIQGTSQLSPYLSIGVLSPRQCWNRLKE 265
           P+   GE+ AL  LR F + K+  Y E+RD    +G S+LSPY ++GVLSPR      + 
Sbjct: 2   PLPEPGEEAALAGLRAFLEAKLPRYAEERDRLDGEGGSRLSPYFALGVLSPRLAAWEAER 61

Query: 266 EFVDLLIKPKSGAFSWLNELIWREFYRHLMAFYPSVCMGKPFIPWTEKIEWNKDSHLLQA 325
              +       GA  W+ EL+WR+F  HL+  +P +   +P  P  +   W +D  L QA
Sbjct: 62  RGGE-------GARKWVAELLWRDFSYHLLYHFPWMAE-RPLDPRFQAFPWQEDEALFQA 113

Query: 326 WKQGYTGFPIIDAAMRQLNTIGWMHNRLRMITASFLVKDLLVDWRIGEEYFMSQLLDGDL 385
           W +G TG P++DAAMR+L+  G++ NR RM  A F VK LL+ W+  EE F   LLDGD 
Sbjct: 114 WYEGKTGVPLVDAAMRELHATGFLSNRARMNAAQFAVKHLLLPWKRCEEAFRHLLLDGDR 173

Query: 386 ASNNGGWQWAASTGNDSVPYFRIFNPTIQGKRFDPQGTFIRHWLPELNNVPTQYIHAPHS 445
           A N  GWQWA   G D+ PYFR+FNP +QG+R DP+G +++ W PE  +           
Sbjct: 174 AVNLQGWQWAGGLGVDAAPYFRVFNPVLQGERHDPEGRWLKRWAPEYPSYA--------- 224

Query: 446 WLDKNDLSLNYPLPIVDHKK 465
                        P+VD ++
Sbjct: 225 ----------PKDPVVDLEE 234

SCOP domain information

class: All alpha proteins
fold: Cryptochrome/photolyase FAD-binding domain
superfamily: Cryptochrome/photolyase FAD-binding domain
family: Cryptochrome/photolyase FAD-binding domain
domain: C-terminal domain of DNA photolyase
species: Thermus thermophilus [TaxId: 274]