HHsearch alignment for GI: 254781171 and conserved domain: COG1823
>COG1823 Predicted Na+/dicarboxylate symporter [General function prediction only].
Probab=100.00 E-value=0 Score=520.06 Aligned_cols=405 Identities=21% Similarity=0.367 Sum_probs=361.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
Q ss_conf 44544999999999999999999688757----------88878789999999999999999999999832531134665
Q gi|254781171|r 10 DKQQKAYLLYVSSILIGIFSGTTDYVIFN----------ETAEFIVNVFVRIFKFISLPLISLSLIVSLSKCVPEQGMGK 79 (420)
Q Consensus 10 ~k~~k~~i~l~~~illGi~~G~~~~~~~~----------~~~~~iG~ifi~lLkmiviPLIf~sii~~I~~l~~~~~~gk 79 (420)
T Consensus 25 ~k~~slskrV~~aL~lG~vfG~~Lq~~~g~~~~~~~~t~~W~nivgnGYV~LLqMivmPLVfiSIlsAi~kl~~~~~lgK 104 (458)
T COG1823 25 RKQISLSKRVLIALVLGVVFGLALQYIYGTDSPVLKETIDWFNIVGNGYVRLLQMIVMPLVFISILSAIAKLDNASKLGK 104 (458)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
T ss_conf 98877999999999999999999999966996577767789998503999999999999999999999999871344114
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC------------CCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHH---
Q ss_conf 899999999999999999987501234864101------------10000122244768989998536640457655---
Q gi|254781171|r 80 LWGKTVFYTMLTTMLAASVALCTYGLISPSNMI------------TKPDVAVNIGKMNFWNYVANLIPNNVVAPFLE--- 144 (420)
Q Consensus 80 i~~~ti~~~~~tt~iA~~igl~~~~l~~Pg~~~------------~~~~~~~~~~~~~~~~~l~~liP~Ni~~ala~--- 144 (420)
T Consensus 105 is~l~i~~ll~ttaIAA~iGi~~~~~fgLtA~~l~~G~~e~a~~~~i~~~~~~~~~~tipq~ilslIP~NpF~dlTGa~~ 184 (458)
T COG1823 105 ISLLTIGTLLFTTAIAALIGILVALLFGLTAEGLVQGDAETARISEIQTYVGKVADLTIPQLILSLIPKNPFADLTGANP 184 (458)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHCCCC
T ss_conf 68999999999999999999999998167689886273888889999988736664113799998658992367636896
Q ss_pred HCCCHHHHHHHHHHHHHHHHCCCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
Q ss_conf 1132053556664213774046453--01799999999999999989879897778789999999850112111012468
Q gi|254781171|r 145 SQVIGILLISGSIGIATHFITDKHI--KSSTIVFFEGIHSIFLTITNWVMKIIPIALGSFIAVTILQFKKGLNISGLGEY 222 (420)
Q Consensus 145 gniL~iivfai~~Gia~~~~~~k~~--~~~~~~~~~~~~~i~~~ii~~im~l~Pigvf~lia~~~~~~~~~~~l~~l~~~ 222 (420)
T Consensus 185 tSiIaVVIFa~~lGiAalk~~k~~~~~ge~~~~~I~t~~~ivM~lV~~VirLTPYgV~AlMtkv~ats~~~-~I~~Lg~F 263 (458)
T COG1823 185 TSIIAVVIFAAFLGIAALKLSKKDPEKGERFKAAIDTLQSIVMKLVRLVIRLTPYGVLALMTKVVATSNLE-DIIKLGSF 263 (458)
T ss_pred CCEEEHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHH-HHHHHHHH
T ss_conf 66563059999999999986001667676999999999999999999999716199999999998525699-99998769
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC
Q ss_conf 99999999999999987664412504110011002478898885176550779999997317899889989999998737
Q gi|254781171|r 223 LSVVILSNLIQGFIVLPVILYIKGFNPLTIVKGMFPALAVAFFSKSSAGTLPVTMRTAEKNLNISPEVSRSILPFCTSIN 302 (420)
Q Consensus 223 l~~~~~~~~i~~~v~~~~i~~~~~~np~~~~k~~~~~~~~Af~T~SS~atlP~~l~~~~~~lgv~~~i~~fviPlG~tin 302 (420)
T Consensus 264 ivAsY~Ai~~M-FvvH~iLL~~~g~NPi~Y~Kkv~PvL~FAFtSRSSAatiPlnietQt~klGV~~~IANfaASFG~tiG 342 (458)
T COG1823 264 IVASYIAIFIM-FVVHGILLALNGVNPIKYFKKVWPVLTFAFTSRSSAATIPLNIETQTRKLGVPEGIANFAASFGATIG 342 (458)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHCCCCHHHHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCC
T ss_conf 99999999999-99999999980887899999886787631033453355774279988762991888888987442025
Q ss_pred CCCCH-HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
Q ss_conf 88505-67799999974236978895679999999999984213886415999999999754999999999996577641
Q gi|254781171|r 303 MNGCA-AFICITLIYVMQNNGIEATFSTLFLWILMASVISAIGTAGVPMGCFFLSASLLTNMGIPINIMSMILPFYSIVD 381 (420)
Q Consensus 303 m~G~a-i~~~~~~~f~a~~~gi~l~~~~~~~~i~~~~v~as~g~~gvPg~~~v~~~~vl~~~glP~~~~~lli~id~i~D 381 (420)
T Consensus 343 QNGCAGiyPAmlAvMVAPtvgi~p~d~~fi~tli~vv~IsS~GvAGVGGGATfAAliVLs~l~lPv~lvgLlIsIEPlID 422 (458)
T COG1823 343 QNGCAGIYPAMLAVMVAPTVGINPLDPHFIATLIGVVTISSFGVAGVGGGATFAALIVLSALGLPVALVGLLISIEPLID 422 (458)
T ss_pred CCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_conf 67712431999999864335889888899999999999851331667842889999999726973999989985126776
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 56789998778999999998730001347754543
Q gi|254781171|r 382 MFETTLNVWSDSCVTVIVNKSYPKSSDHPENAIVQ 416 (420)
Q Consensus 382 ~~rT~~NV~gd~~~a~iv~~~~~~~~~~~~~~~~~ 416 (420)
T Consensus 423 MgRTAlNV~GSM~aG~iT~k~lk~~d~~~~~~~~~ 457 (458)
T COG1823 423 MGRTALNVSGSMTAGTITSKLLKQTDKEIYNSEDD 457 (458)
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 52676366541578788899988614344433235