HHsearch alignment for GI: 254781171 and conserved domain: COG3633
>COG3633 SstT Na+/serine symporter [Amino acid transport and metabolism].
Probab=100.00 E-value=0 Score=380.06 Aligned_cols=395 Identities=22% Similarity=0.315 Sum_probs=330.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
Q ss_conf 98456401544544999999999999999999688757888787899999999999999999999998325311346658
Q gi|254781171|r 1 MSLGKMITLDKQQKAYLLYVSSILIGIFSGTTDYVIFNETAEFIVNVFVRIFKFISLPLISLSLIVSLSKCVPEQGMGKL 80 (420)
Q Consensus 1 m~~~~~~~~~k~~k~~i~l~~~illGi~~G~~~~~~~~~~~~~iG~ifi~lLkmiviPLIf~sii~~I~~l~~~~~~gki 80 (420)
T Consensus 2 ~~~s~l~~~~~~gsLv~qI~iGl~lGi~~a~~s~~-~a~~vgllG~lFv~aLkAvAPvLVf~LV~asIan~k~gq~-t~i 79 (407)
T COG3633 2 MRTSKLFRLLARGSLVKQILIGLVLGILLAIISPP-AAEAVGLLGTLFVGALKAVAPVLVFILVMASIANHKKGQK-TNI 79 (407)
T ss_pred CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CCC
T ss_conf 86108999998100799999999999999963865-7878627899999999888889999999999861331452-465
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH---CCCCHHHHHHHHCCCHHHHHHHHH
Q ss_conf 99999999999999999987501234864101100001222447689899985---366404576551132053556664
Q gi|254781171|r 81 WGKTVFYTMLTTMLAASVALCTYGLISPSNMITKPDVAVNIGKMNFWNYVANL---IPNNVVAPFLESQVIGILLISGSI 157 (420)
Q Consensus 81 ~~~ti~~~~~tt~iA~~igl~~~~l~~Pg~~~~~~~~~~~~~~~~~~~~l~~l---iP~Ni~~ala~gniL~iivfai~~ 157 (420)
T Consensus 80 -r~IivLYl~GTF~Aal~AVia-~f~FP~~lvL~~~~~~~spP~gi~eVl~~Ll~~~VdNPinAl~~aNyiGiLaWaigl 157 (407)
T COG3633 80 -RPIIVLYLLGTFSAALVAVIA-SFAFPSTLVLASSAGDISPPSGIVEVLKSLLMSLVDNPINALLNANYIGILAWAIGL 157 (407)
T ss_pred -CEEEHHHHHHHHHHHHHHHHH-HHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHH
T ss_conf -333358988888999999998-601761699834677779973299999999999853778898617702256999877
Q ss_pred HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 21377404645301799999999999999989879897778789999999850112111012468999999999999999
Q gi|254781171|r 158 GIATHFITDKHIKSSTIVFFEGIHSIFLTITNWVMKIIPIALGSFIAVTILQFKKGLNISGLGEYLSVVILSNLIQGFIV 237 (420)
Q Consensus 158 Gia~~~~~~k~~~~~~~~~~~~~~~i~~~ii~~im~l~Pigvf~lia~~~~~~~~~~~l~~l~~~l~~~~~~~~i~~~v~ 237 (420)
T Consensus 158 G~Alrh-----~s~~tk~~~~d~~e~vs~iV~~iI~fAP~GIfgLVasT~a~tG~~a-L~gYa~LL~vLvg~Mlfva~VV 231 (407)
T COG3633 158 GLALRH-----ASDTTKNLVNDLSEAVSKIVKVVIRFAPIGIFGLVASTLAETGFGA-LWGYAQLLAVLVGCMLFVALVV 231 (407)
T ss_pred HHHHHH-----CCHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH
T ss_conf 699885-----0176899999999888877730254367406678788888601789-9989999999999999999985
Q ss_pred HHHHHHH-CCCCCCCH-HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHH
Q ss_conf 8766441-25041100-110024788988851765507799999973178998899899999987378850567799999
Q gi|254781171|r 238 LPVILYI-KGFNPLTI-VKGMFPALAVAFFSKSSAGTLPVTMRTAEKNLNISPEVSRSILPFCTSINMNGCAAFICITLI 315 (420)
Q Consensus 238 ~~~i~~~-~~~np~~~-~k~~~~~~~~Af~T~SS~atlP~~l~~~~~~lgv~~~i~~fviPlG~tinm~G~ai~~~~~~~ 315 (420)
T Consensus 232 Npliv~~kiRrNPyPLV~~ClReSg~tAFFTRSSAANIPVNm~Lc-~kl~ldedtYsvSIPLGAtINMaGAAITItvLtL 310 (407)
T COG3633 232 NPLIVYWKIRRNPYPLVLTCLRESGVTAFFTRSSAANIPVNMALC-KKLGLDEDTYSVSIPLGATINMAGAAITITVLTL 310 (407)
T ss_pred CCCEEEEEECCCCCCHHHHHHHHCCEEEEEECCCCCCCCCCHHHH-HHCCCCCCCEEEEEECCCEEECCCHHHHHHHHHH
T ss_conf 322478875278866268876521707998524345786009999-8729985421576005761104541256799999
Q ss_pred HHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH----HHHHHHHHHHHH
Q ss_conf 9742369788956799999999999842138864159999999997549999999999965776----415678999877
Q gi|254781171|r 316 YVMQNNGIEATFSTLFLWILMASVISAIGTAGVPMGCFFLSASLLTNMGIPINIMSMILPFYSI----VDMFETTLNVWS 391 (420)
Q Consensus 316 f~a~~~gi~l~~~~~~~~i~~~~v~as~g~~gvPg~~~v~~~~vl~~~glP~~~~~lli~id~i----~D~~rT~~NV~g 391 (420)
T Consensus 311 aAvhT~gi~vd~~tAlLLSvVA~-~~ACGASGVAGGSLLLIPlACslFgI~~DvAmqvV~VGFIIgvlQDS~ETALNSST 389 (407)
T COG3633 311 AAVHTLGIPVDLPTALLLSVVAS-VCACGASGVAGGSLLLIPLACSLFGISNDVAMQVVAVGFIIGVLQDSAETALNSST 389 (407)
T ss_pred HHHHHCCCCCHHHHHHHHHHHHH-HHHCCCCCCCCCEEEEHHHHHHHCCCCHHHHHHHHEEEEEEEEEHHHHHHHHCCCC
T ss_conf 88886286015889999999999-98335566668615644656666399668888764010688886335777655661
Q ss_pred HHHHHHHHHHHHHHHH
Q ss_conf 8999999998730001
Q gi|254781171|r 392 DSCVTVIVNKSYPKSS 407 (420)
Q Consensus 392 d~~~a~iv~~~~~~~~ 407 (420)
T Consensus 390 DVLFTAa~c~ae~~k~ 405 (407)
T COG3633 390 DVLFTAAACQAEDRKL 405 (407)
T ss_pred HHHHHHHHHHHHHHHH
T ss_conf 2799998746677632