HHsearch results for GI: 254781171 and protein with PDBid: 2nwl_A
>2nwl_A GLTPH, glutamate symport protein; alpha helical, membrane protein, helical hairpin, unwound region, transport protein; HET: PLM; 2.96A {Pyrococcus horikoshii} PDB: 2nww_A* 1xfh_A* 2nwx_A* 3kbc_A
Probab=100.00 E-value=0 Score=635.74 Aligned_cols=402 Identities=25% Similarity=0.374 Sum_probs=363.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
Q ss_conf 984564015445449999999999999999996887-----578887878999999999999999999999983253113
Q gi|254781171|r 1 MSLGKMITLDKQQKAYLLYVSSILIGIFSGTTDYVI-----FNETAEFIVNVFVRIFKFISLPLISLSLIVSLSKCVPEQ 75 (420)
Q Consensus 1 m~~~~~~~~~k~~k~~i~l~~~illGi~~G~~~~~~-----~~~~~~~iG~ifi~lLkmiviPLIf~sii~~I~~l~~~~ 75 (420)
|.++| ..+|.++..+++.|+++|+++|...+.. ..+|.+++||+|+|++||+++|+||+|++.|++++++ +
T Consensus 1 m~~~~---k~~~~~l~~~ilia~v~Gi~~G~~~~~~~~~~~~~~~l~~~G~lFi~lLkm~vvPlI~~sii~~i~~l~~-~ 76 (422)
T 2nwl_A 1 MGLYR---KYIEYPVLIKILIGLILGAIVGLILGHYGYAHAVHTYVKPFGDLFVRLLKMLVMPIVFASLVVGAASISP-A 76 (422)
T ss_dssp ------------CCCTTHHHHHHHHHHHHHHHHHHTTTHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTT-T
T ss_pred CCHHH---HHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-H
T ss_conf 92888---7522779999999999999999996542212789999999999999999999999999999999975340-1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC---CCCCCCCHHHHHHHHCCCCHHHHHHHHCCCHHHH
Q ss_conf 4665899999999999999999987501234864101100001---2224476898999853664045765511320535
Q gi|254781171|r 76 GMGKLWGKTVFYTMLTTMLAASVALCTYGLISPSNMITKPDVA---VNIGKMNFWNYVANLIPNNVVAPFLESQVIGILL 152 (420)
Q Consensus 76 ~~gki~~~ti~~~~~tt~iA~~igl~~~~l~~Pg~~~~~~~~~---~~~~~~~~~~~l~~liP~Ni~~ala~gniL~iiv 152 (420)
+.||++.|++.||+.++++|+.+|+.++.+++||.+....... ...+..++.|++.+++|+|++++++++|++|+++
T Consensus 77 ~~gri~~k~i~~~~~tt~~a~~lgl~~~~~~~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~Ni~~a~~~~~~l~vi~ 156 (422)
T 2nwl_A 77 RLGRVGVKIVVYYLLTSAFAVTLGIIMARLFNPGAGIHLAVGGQQFQPHQAPPLVHILLDIVPTNPFGALANGQVLPTIF 156 (422)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCSCCCCCCCCCC-----CCTHHHHGGGSCSCHHHHHHTCCHHHHHH
T ss_pred HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHCCCCHHHHHHCCCCCHHHH
T ss_conf 00107999999999999999999999998438775400121044305534774999999838897799964588630368
Q ss_pred HHHHHHHHHHHHCCCCC------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
Q ss_conf 56664213774046453------017999999999999999898798977787899999998501121110124689999
Q gi|254781171|r 153 ISGSIGIATHFITDKHI------KSSTIVFFEGIHSIFLTITNWVMKIIPIALGSFIAVTILQFKKGLNISGLGEYLSVV 226 (420)
Q Consensus 153 fai~~Gia~~~~~~k~~------~~~~~~~~~~~~~i~~~ii~~im~l~Pigvf~lia~~~~~~~~~~~l~~l~~~l~~~ 226 (420)
||+++|+|+.+.++++. .+++++++|+++++++|+++|+|+++|+|+|+++++..++++.+ .+..+++|+.++
T Consensus 157 fai~~Gia~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~iv~~i~~l~Pigvf~l~a~~~~~~g~~-~l~~l~~~~~~~ 235 (422)
T 2nwl_A 157 FAIILGIAITYLMNSENEKVRKSAETLLDAINGLAEAMYKIVNGVMQYAPIGVFALIAYVMAEQGVH-VVGELAKVTAAV 235 (422)
T ss_dssp HHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSHHHHHHHHHHHHHTTTGGG-CCTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH-HHHHHHHHHHHH
T ss_conf 9888899999840100366678889999999999999999999999886999999999987302346-788899999999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCC
Q ss_conf 99999999999876644125041100110024788988851765507799999973178998899899999987378850
Q gi|254781171|r 227 ILSNLIQGFIVLPVILYIKGFNPLTIVKGMFPALAVAFFSKSSAGTLPVTMRTAEKNLNISPEVSRSILPFCTSINMNGC 306 (420)
Q Consensus 227 ~~~~~i~~~v~~~~i~~~~~~np~~~~k~~~~~~~~Af~T~SS~atlP~~l~~~~~~lgv~~~i~~fviPlG~tinm~G~ 306 (420)
++++++|.+++++++.+++|+||++|+|+.+|++++||+|+||+||+|+++||+| |+|+||++++|++|+|+|+|||||
T Consensus 236 ~~~~~l~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~Af~T~SS~atlP~~l~~~~-~~gv~~~i~~fvlPlg~t~n~~G~ 314 (422)
T 2nwl_A 236 YVGLTLQILLVYFVLLKIYGIDPISFIKHAKDAMLTAFVTRSSSGTLPVTMRVAK-EMGISEGIYSFTLPLGATINMDGT 314 (422)
T ss_dssp HHHHHHHHHHTHHHHHHHTTCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH-TTTCCHHHHHHHHHHHTTSCCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH-HCCCCHHHCCEECCCHHHCCCCCH
T ss_conf 9999999999999999995888898898999999999971563214579999999-859783334531563110268845
Q ss_pred HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCH------HHHHHHHHHHHHH
Q ss_conf 5677999999742369788956799999999999842138864159999999997549999------9999999657764
Q gi|254781171|r 307 AAFICITLIYVMQNNGIEATFSTLFLWILMASVISAIGTAGVPMGCFFLSASLLTNMGIPI------NIMSMILPFYSIV 380 (420)
Q Consensus 307 ai~~~~~~~f~a~~~gi~l~~~~~~~~i~~~~v~as~g~~gvPg~~~v~~~~vl~~~glP~------~~~~lli~id~i~ 380 (420)
|+|++++++|++|.||++++.+++. .+++.++++|+|++|+|||+++.+..+++.+|+|. +++++++++||++
T Consensus 315 al~~~~~~if~a~~~g~~lt~~~~~-~~~~~~~l~s~g~~gvPg~~~v~~~~vl~~~glP~~~~~~~~~i~liiaid~l~ 393 (422)
T 2nwl_A 315 ALYQGVCTFFIANALGSHLTVGQQL-TIVLTAVLASIGTAGVPGAGAIMLAMVLHSVGLPLTDPNVAAAYAMILGIDAIL 393 (422)
T ss_dssp HHHHHHHHHHHHHHHTCCCCSSCCH-HHHHHHHHHHHHSCSSSSHHHHHHHHHHHHHTCCTTSTTHHHHHHHHHTTHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCCHHHHH-HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHC
T ss_conf 8999999999999948999989999-999999999984478616799999999998499876411566899999798660
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 15678999877899999999873000134
Q gi|254781171|r 381 DMFETTLNVWSDSCVTVIVNKSYPKSSDH 409 (420)
Q Consensus 381 D~~rT~~NV~gd~~~a~iv~~~~~~~~~~ 409 (420)
||+||++||+||++++.+++|+|++.|++
T Consensus 394 D~~rT~~NV~gd~~~a~iv~k~~g~ld~~ 422 (422)
T 2nwl_A 394 DMGRTMVNVTGDLTGTAIVAKTEGTLVPR 422 (422)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHC------
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 66189994987899999999973888899