BLAST/PSIBLAST alignment of GI: 254781171 and GI: 52841121 at iteration 1

>gi|52841121|ref|YP_094920.1| hypothetical protein lpg0886 [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 426
>gi|54296906|ref|YP_123275.1| hypothetical protein lpp0947 [Legionella pneumophila str. Paris] Length = 426
>gi|52628232|gb|AAU26973.1| sodium:dicarboxylate symporter [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 426
>gi|53750691|emb|CAH12098.1| hypothetical protein lpp0947 [Legionella pneumophila str. Paris] Length = 426

 Score =  390 bits (1001), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 192/404 (47%), Positives = 280/404 (69%), Gaps = 8/404 (1%)

Query: 6   MITLDKQQKAY-----LLYVSSILIGIFSGTTDYVIFNETAEFIVNVFVRIFKFISLPLI 60
           M     Q+  Y     L+Y + I +GI SG +D     ET   I ++F+++FK ISLP+I
Sbjct: 1   MCAAHHQKNKYIFSTPLIYAAMIGLGIISGLSDLPFLKETGLLISDLFIKLFKCISLPII 60

Query: 61  SLSLIVSLSKCVPEQGMGKLWGKTVFYTMLTTMLAASVALCTYGLISPSNMITKPDVA-- 118
           SLS+IV+L+    +  M  +W +T+ YT  TT++AA ++   Y LI PS +    D A  
Sbjct: 61  SLSIIVTLANYQTDSLMKSVWQRTIKYTFATTLVAALISCFLYILIHPSTVQVNLDAANP 120

Query: 119 VNIGKMNFWNYVANLIPNNVVAPFLESQVIGILLISGSIGIATHFITDKHIKSSTIVFFE 178
            +   + +  Y++N+IP N+++PFLE QV+G+LL+S  IG A   I +   + + I FF 
Sbjct: 121 KSTSSLGYLGYLSNMIPTNLLSPFLEQQVMGVLLLSIVIGFAVRQIPETEPRETIIRFFR 180

Query: 179 GIHSIFLTITNWVMKIIPIALGSFIAVTILQFKKGLNISGLGEYLSVVILSNLIQGFIVL 238
           G H +FL +T W++K+IP+ L  FI  T++Q + G++I G+G+YL +++L+NLIQG ++L
Sbjct: 181 GAHGMFLVMTKWIIKLIPLGLFGFITSTVIQLRSGMDIKGIGQYLVIIVLANLIQGLVIL 240

Query: 239 PVILYIKGFNPLTIVKGMFPALAVAFFSKSSAGTLPVTMRTAEKNLNISPEVSRSILPFC 298
           P+ L   G  P + ++ M PAL+VAFFSKSS GTLPVTM T E NL ++P+VSR +LP C
Sbjct: 241 PLWLKSNGIKPFSSMRAMLPALSVAFFSKSSVGTLPVTMNTVEANLKVNPQVSRFVLPLC 300

Query: 299 TSINMNGCAAFICITLIYVMQNNGIEATFSTLFLWILMASVISAIGTAGVPMGCFFLSAS 358
           TSINMNGCAAFI  T+IY+MQ++GI+ +++T+ +W+L+ S I+AIG AGVPMGCFFLS S
Sbjct: 301 TSINMNGCAAFIFATVIYLMQSHGIQVSYATMGIWVLV-STIAAIGNAGVPMGCFFLSVS 359

Query: 359 LLTNMGIPINIMSMILPFYSIVDMFETTLNVWSDSCVTVIVNKS 402
           LL++M +PI +M +ILPFY ++DM ET LNVWSD+CVT +VN  
Sbjct: 360 LLSSMNVPITLMGVILPFYGLIDMLETALNVWSDACVTKVVNDK 403