HHsearch alignment for GI: 254781172 and conserved domain: KOG0966

Probab=92.23  E-value=0.98  Score=24.87  Aligned_cols=198  Identities=19%  Similarity=0.228  Sum_probs=105.0

Q ss_pred             CCCEEEEEEECCEEEEEEEEECCEEEEEEECCCCHHHHHHHHHHH---HHCCCCCCCCCCCC---CEEEEEEEEEEECHH
Q ss_conf             761199994158189999985998998886598655666999775---31024322335445---504899999985202
Q gi|254781172|r  124 NSIFFTLEPKIDGTMITIRYEKGKFVYAALRGDGHSGEDVSACIR---AIPTIPRVLSLNIP---EIIEVRGEVYISKND  197 (731)
Q Consensus       124 ~~~~~~vepKiDG~sisl~Y~~G~L~~a~TRGdG~~GeDVT~n~~---~i~~iP~~l~~~~~---~~ieiRGEv~m~~~~  197 (731)
T Consensus       248 ~~~~f~lEtK~DGERiQlHk~g~~~-~yfSR----Ng~dyT~~yg~s~~~g~lt~~i~~~f~~~v~~cILDGEMm~wD~~  322 (881)
T KOG0966         248 GGQDFYLETKFDGERIQLHKDGGEY-KYFSR----NGNDYTYEYGASYAHGTLTQRIHGAFNKEVESCILDGEMMTWDTK  322 (881)
T ss_pred             CCCCEEEEEECCCCEEEEEECCCEE-EEEEC----CCCCHHHHCCCCCCCCCCCHHHHHHHHHCCHHEEECCEEEEEECC
T ss_conf             5993699862167057998438778-99832----775315440765111420188876413102401734647886053


Q ss_pred             HHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHCCCEEEEEEECCCCCC--CCCCCHHHHHHHHHCCCCCCCCE---
Q ss_conf             1234556431485433423456777752345555301110566410245433--21000036899997599665414---
Q gi|254781172|r  198 FLALNDEMIAVGRKPYANPRNAASGILRRLNPTDITRYLNFFVHGLGKTSEI--FAKGQYEMLQKMRCLGFPVNNGV---  272 (731)
Q Consensus       198 F~~lN~~~~~~g~~~f~NpRN~aaG~lr~~d~~~~~r~L~f~ay~~~~~~~~--~~~~~~e~l~~L~~~GF~v~~~~---  272 (731)
T Consensus       323 ~~~f----~~~G~-----~~di-----k~~~~~~~~~qp~yvvfDLLylNgksL~~~~l~qR~e~L~~v~~p~~~~iei~  388 (881)
T KOG0966         323 TKRF----CPFGS-----NSDI-----KELSSRDGSQQPCYVVFDLLYLNGKSLFGAPLHQRLEILKKVIVPKSGRIEIV  388 (881)
T ss_pred             HHHH----CCCCC-----HHHH-----HHHHCCCCCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCEEEEE
T ss_conf             1121----14786-----2568-----87520256777317886550015853677528999999874246778705886


Q ss_pred             --EEEECCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCHHCCCCCCCCCCCCCCEEEECCCC-------CEEEEEEEEEE
Q ss_conf             --887403211345566553100112343763777311000111587656866312311456-------21589987889
Q gi|254781172|r  273 --RQANTFHGIVSYYNEMKSIRSTLPYDIDGLVYKVDEFSLQKQLGERARSPRWMISHKFAE-------KQASTRLLDID  343 (731)
Q Consensus       273 --~~~~~~~~~~~~~~~~~~~r~~l~y~iDGiVikvn~~~~q~~lG~ts~~PrwaiA~Kf~~-------e~~~T~v~~I~  343 (731)
T Consensus       389 ~~~~~~~~edi~~~f~~ai~------~~~EGIVlK~~~S~Y~p----g~R~~gW---~K~KPeYlkg~g~dLD~lIiGgy  455 (881)
T KOG0966         389 RSEVGSTKEDIEQFFEEAID------NGEEGIVLKKPDSSYVP----GQRSNGW---IKLKPEYLKGFGEDLDLLIIGGY  455 (881)
T ss_pred             EHHHCCCHHHHHHHHHHHHH------CCCCCEEEECCCCCCCC----CCCCCCC---EEECHHHHHHCCCCCCEEEEECC
T ss_conf             24301529999999999985------68872598456764475----5457983---76468998423766537999324


Q ss_pred             EEEC-CCCEEE
Q ss_conf             9403-562258
Q gi|254781172|r  344 IQIG-RTGILT  353 (731)
Q Consensus       344 wqvg-RtG~it  353 (731)
T Consensus       456 ~G~g~rgg~~~  466 (881)
T KOG0966         456 YGRGDRGGKVL  466 (881)
T ss_pred             CCCCCCCCEEE
T ss_conf             58777787121