HHsearch alignment for GI: 254781172 and conserved domain: LOAD_ligase

Probab=98.69  E-value=3.4e-07  Score=74.80  Aligned_cols=155  Identities=21%  Similarity=0.278  Sum_probs=88.7

Q ss_pred             EEEEEEECCEEEEEEEEECCEEEEEEECCCCHHHHHHHHH---HHHHCCCCCCCCCCCCCEEEEEEEEEEECHHHHHHHH
Q ss_conf             1999941581899999859989988865986556669997---7531024322335445504899999985202123455
Q gi|254781172|r  127 FFTLEPKIDGTMITIRYEKGKFVYAALRGDGHSGEDVSAC---IRAIPTIPRVLSLNIPEIIEVRGEVYISKNDFLALND  203 (731)
Q Consensus       127 ~~~vepKiDG~sisl~Y~~G~L~~a~TRGdG~~GeDVT~n---~~~i~~iP~~l~~~~~~~ieiRGEv~m~~~~F~~lN~  203 (731)
T Consensus         1 e~~~e~K~DG~R~~~~~~~~~-v~~~SR----~g~~~t~~f~~~~~~~~~~~--~~~~~~~~iLDGEl~~~~~~~-----   68 (184)
T LOAD_ligase       1 EYYVEEKYDGERVQIHKDGDG-VYFFSR----NGEDITDYFPDVKTALKIPL--KLSGLKNLILDGELVVDDVDF-----   68 (184)
T ss_pred             CCEEEEEECEEEEEEEEECCE-EEEECC----CCCCCCCCCCHHHHHHHHHH--HCCCCCCEEEEEEEEEECCCC-----
T ss_conf             936898886089999998999-999979----99876100417899987665--025788779987999736999-----


Q ss_pred             HHHHCCCCCCCCHHHHHHHHHHCCCHH-HHHCCCEEEEEEECCCCCCCC--CCCHHHHHHHHHCCCCCCCC-----EEEE
Q ss_conf             643148543342345677775234555-530111056641024543321--00003689999759966541-----4887
Q gi|254781172|r  204 EMIAVGRKPYANPRNAASGILRRLNPT-DITRYLNFFVHGLGKTSEIFA--KGQYEMLQKMRCLGFPVNNG-----VRQA  275 (731)
Q Consensus       204 ~~~~~g~~~f~NpRN~aaG~lr~~d~~-~~~r~L~f~ay~~~~~~~~~~--~~~~e~l~~L~~~GF~v~~~-----~~~~  275 (731)
T Consensus        69 --------~f~~~~~~~----~~~~~~~~~~~~~~~~vFDil~~~g~~~~~~~~~~R~~~L~~~~~~~~~~~~~~~~~~~  136 (184)
T LOAD_ligase      69 --------PFQLLRNRK----RKSVRVKDMKEPLEYFVFDILYLNGEDLTDLPLEERRKILEKLIKEIKDVRAIKNITVI  136 (184)
T ss_pred             --------CHHHHHHHH----CCCCCCHHHCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEC
T ss_conf             --------989998775----33665122215618999996364898154588999999999974125883598789954


Q ss_pred             ECCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCHHC
Q ss_conf             403211345566553100112343763777311000
Q gi|254781172|r  276 NTFHGIVSYYNEMKSIRSTLPYDIDGLVYKVDEFSL  311 (731)
Q Consensus       276 ~~~~~~~~~~~~~~~~r~~l~y~iDGiVikvn~~~~  311 (731)
T Consensus       137 ~~~~~~~~~~~~~~------~~g~EGimiK~~~s~Y  166 (184)
T LOAD_ligase     137 DDVEELNKFLEKAL------GEGIEGLVIKDPDSPY  166 (184)
T ss_pred             CCHHHHHHHHHHHH------HCCCCEEEEECCCCCC
T ss_conf             99999999999998------6899679987899978