HHsearch alignment for GI: 254781172 and conserved domain: PRK00024

>PRK00024 radC DNA repair protein RadC; Reviewed.
Probab=90.23  E-value=1.5  Score=23.46  Aligned_cols=144  Identities=18%  Similarity=0.299  Sum_probs=76.9

Q ss_pred             HHHHHHHHHHCCHHHHH-HHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHCCHH-----
Q ss_conf             23466677630101111-689999998829989999978977612511778761388867899999999966979-----
Q gi|254781172|r  547 NISLERFIFSLGIRHVG-AEIARSLAKYYLSYQNFAQEINNIIAHNNDDWLSLIRVPLVGDIIAQAIVEFYQNPR-----  620 (731)
Q Consensus       547 ~~~L~r~L~ALGI~~vG-~~~Ak~La~~f~si~~l~~~~~~~~~~~~~~~e~L~~I~GiG~~~A~si~~ff~~~~-----  620 (731)
T Consensus        26 D~ELLallL~~g~~~~d~~~lA~~ll~~~g~l~~l~~a----------~~~eL~~i~GiG~~kA~~l~a~~El~rR~~~~   95 (224)
T PRK00024         26 DAELLAILLRTGTKGKSVLDLARELLERFGSLRGLLDA----------SLEELQEIKGIGPAKAAQLKAALELARRILAE   95 (224)
T ss_pred             HHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHC----------CHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHC
T ss_conf             79999999846999999899999999985999999870----------88988447898899999999999999999752


Q ss_pred             ---------HHHHHHHHHH-HCCCCCCCC----CCCCCCCCCCCEEEEECCCCCC---CHHHHHHHHHHCCCEEEEEEEC
Q ss_conf             ---------9999999997-338776543----2246882168669997258899---8789999999829849981116
Q gi|254781172|r  621 ---------NICAVEALLK-EVSPSIGRH----EKNVSSEIENKKLVFTGTLQKI---QRHKAQEYVTQLGAVVSAILSR  683 (731)
Q Consensus       621 ---------n~~~i~~L~~-~~~~~~~~~----~~~~~~~l~gk~vV~TGtl~~~---~R~e~~~~ie~~Ggkv~sSVSk  683 (731)
T Consensus        96 ~~~~~~~l~s~~~v~~~~~~~l~~~~~E~f~vl~Ld~~n~li~~~~i~~Gt~~~~~v~pReI~~~Al~~~A---------  166 (224)
T PRK00024         96 RLREREVLTSPEDVADYLQAELRDEEQEVFVVLFLDTKNRLIADEELFIGTLNSSIVHPREIVKEALKLNA---------  166 (224)
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEEEECCCCCEEEECHHHHHHHHHHHCC---------
T ss_conf             10469874899999999999865667867999998787775568997047886467628999999998278---------


Q ss_pred             CEEEEEE-----CC-CCCC-------HHHH-HHHCCCEEEC
Q ss_conf             3217997-----78-8886-------3798-9974991737
Q gi|254781172|r  684 KTDIIIV-----GD-NPGS-------KLEK-AQQLGVKIMN  710 (731)
Q Consensus       684 kT~~LI~-----ge-~~gS-------Kl~K-A~~LgI~Ii~  710 (731)
T Consensus       167 -~~iIl~HNHPSG~~~PS~~Di~~T~~l~~a~~~lgI~llD  206 (224)
T PRK00024        167 -AALILAHNHPSGDPEPSQADILITKRLKEAGELLGIRLLD  206 (224)
T ss_pred             -CEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEE
T ss_conf             -8799995469999998988999999999999768986861