HHsearch alignment for GI: 254781172 and conserved domain: PRK05601

>PRK05601 DNA polymerase III subunit epsilon; Validated.
Probab=98.71  E-value=6.4e-08  Score=80.41  Aligned_cols=78  Identities=15%  Similarity=0.283  Sum_probs=70.1

Q ss_pred             CCCCCCEEEEECCCCCCCHHHHHHHHHHCCCEEEEEEECCEEEEEECCCCC--CHHHHHHHCCCEEECHHHHHHHHHHHC
Q ss_conf             821686699972588998789999999829849981116321799778888--637989974991737999999998828
Q gi|254781172|r  645 SEIENKKLVFTGTLQKIQRHKAQEYVTQLGAVVSAILSRKTDIIIVGDNPG--SKLEKAQQLGVKIMNEEQFLFLLQQYN  722 (731)
Q Consensus       645 ~~l~gk~vV~TGtl~~~~R~e~~~~ie~~Ggkv~sSVSkkT~~LI~ge~~g--SKl~KA~~LgI~Ii~e~ef~~ll~~~~  722 (731)
T Consensus       293 ~LvqGMrVvvage~~-~~rd~Li~rav~AGL~ysesvsR~TSLVVcN~~~~~~GKa~hA~r~GIPlv~d~~Fl~ll~~V~  371 (377)
T PRK05601        293 GLVAGMEVVVAPEIE-MDPDIIIQAGVDAGLSYSEKLTRQTSVVVCNQTRDIDGKAMHAQRKGIPLLSDVAFLAAVERVK  371 (377)
T ss_pred             CCCCCCEEEEECCCC-CCHHHHHHHHHHHCCHHHHCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCC
T ss_conf             565788899817877-8989999999870620200204542279957998763066777761998468899999998577


Q ss_pred             C
Q ss_conf             6
Q gi|254781172|r  723 T  723 (731)
Q Consensus       723 ~  723 (731)
T Consensus       372 p  372 (377)
T PRK05601        372 E  372 (377)
T ss_pred             C
T ss_conf             5