HHsearch alignment for GI: 254781172 and conserved domain: PRK05601
>PRK05601 DNA polymerase III subunit epsilon; Validated.
Probab=98.71 E-value=6.4e-08 Score=80.41 Aligned_cols=78 Identities=15% Similarity=0.283 Sum_probs=70.1
Q ss_pred CCCCCCEEEEECCCCCCCHHHHHHHHHHCCCEEEEEEECCEEEEEECCCCC--CHHHHHHHCCCEEECHHHHHHHHHHHC
Q ss_conf 821686699972588998789999999829849981116321799778888--637989974991737999999998828
Q gi|254781172|r 645 SEIENKKLVFTGTLQKIQRHKAQEYVTQLGAVVSAILSRKTDIIIVGDNPG--SKLEKAQQLGVKIMNEEQFLFLLQQYN 722 (731)
Q Consensus 645 ~~l~gk~vV~TGtl~~~~R~e~~~~ie~~Ggkv~sSVSkkT~~LI~ge~~g--SKl~KA~~LgI~Ii~e~ef~~ll~~~~ 722 (731)
T Consensus 293 ~LvqGMrVvvage~~-~~rd~Li~rav~AGL~ysesvsR~TSLVVcN~~~~~~GKa~hA~r~GIPlv~d~~Fl~ll~~V~ 371 (377)
T PRK05601 293 GLVAGMEVVVAPEIE-MDPDIIIQAGVDAGLSYSEKLTRQTSVVVCNQTRDIDGKAMHAQRKGIPLLSDVAFLAAVERVK 371 (377)
T ss_pred CCCCCCEEEEECCCC-CCHHHHHHHHHHHCCHHHHCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCC
T ss_conf 565788899817877-8989999999870620200204542279957998763066777761998468899999998577
Q ss_pred C
Q ss_conf 6
Q gi|254781172|r 723 T 723 (731)
Q Consensus 723 ~ 723 (731)
T Consensus 372 p 372 (377)
T PRK05601 372 E 372 (377)
T ss_pred C
T ss_conf 5