HHsearch alignment for GI: 254781172 and conserved domain: PRK06195

>PRK06195 DNA polymerase III subunit epsilon; Validated.
Probab=99.77  E-value=1.3e-18  Score=163.09  Aligned_cols=77  Identities=31%  Similarity=0.531  Sum_probs=73.2

Q ss_pred             CCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCEEEEEEECCEEEEEECC---------CCCCHHHHHHHC-----CCEEE
Q ss_conf             8821686699972588998789999999829849981116321799778---------888637989974-----99173
Q gi|254781172|r  644 SSEIENKKLVFTGTLQKIQRHKAQEYVTQLGAVVSAILSRKTDIIIVGD---------NPGSKLEKAQQL-----GVKIM  709 (731)
Q Consensus       644 ~~~l~gk~vV~TGtl~~~~R~e~~~~ie~~Ggkv~sSVSkkT~~LI~ge---------~~gSKl~KA~~L-----gI~Ii  709 (731)
T Consensus       218 ~~~~~g~~vvfTG~l~~~~R~ea~~~~~~~Gg~v~~sVskkT~~lV~G~~d~~~~~~~~~~sK~~kA~~L~~~G~~I~ii  297 (309)
T PRK06195        218 FTAFKEEVVVFTGGLASMTRDEAIGLVRRLGGTVGSSVTKKTTYLVTNTKDIEDLNREEMSNKLKKAIDLKKEGQNIKFL  297 (309)
T ss_pred             CCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCEECCCCCCCCCEEEECCCCHHHCCCCCCCHHHHHHHHHHHCCCCCEEE
T ss_conf             89878998999457997799999999998599966871677778998886311003677766999999998479996796


Q ss_pred             CHHHHHHHHHH
Q ss_conf             79999999988
Q gi|254781172|r  710 NEEQFLFLLQQ  720 (731)
Q Consensus       710 ~e~ef~~ll~~  720 (731)
T Consensus       298 ~E~~fl~~i~~  308 (309)
T PRK06195        298 NEEEFLQKIKE  308 (309)
T ss_pred             CHHHHHHHHHC
T ss_conf             59999998741