HHsearch alignment for GI: 254781172 and conserved domain: PRK07636

>PRK07636 ligB ATP-dependent DNA ligase; Reviewed.
Probab=98.21  E-value=7.8e-05  Score=56.55  Aligned_cols=160  Identities=21%  Similarity=0.282  Sum_probs=96.3

Q ss_pred             CCCCEEEEEEECCEEEEEEEEECCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEECH----HH
Q ss_conf             77611999941581899999859989988865986556669997753102432233544550489999998520----21
Q gi|254781172|r  123 DNSIFFTLEPKIDGTMITIRYEKGKFVYAALRGDGHSGEDVSACIRAIPTIPRVLSLNIPEIIEVRGEVYISKN----DF  198 (731)
Q Consensus       123 ~~~~~~~vepKiDG~sisl~Y~~G~L~~a~TRGdG~~GeDVT~n~~~i~~iP~~l~~~~~~~ieiRGEv~m~~~----~F  198 (731)
T Consensus        15 ~~~~~W~~E~K~DG~R~~~~~~~g~-v~l~SR----ng~d~t~~fPel~------~~~~~~~~iLDGEiVv~~~~g~~~F   83 (269)
T PRK07636         15 FNSDNYITELKFDGIRLIASKNDGL-IRLYTR----HNNEVTAKFPELL------TLDIPDGTILDGELIVPGSTGAPDF   83 (269)
T ss_pred             CCCCCEEEEEEECEEEEEEEEECCE-EEEEEC----CCCCCHHHCHHHH------HHCCCCCEEEECEEEEECCCCCCCH
T ss_conf             8999747885277099999998999-999908----9988333476889------7348854088245899888988898


Q ss_pred             HHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHCCCEEEEEEECCCCCCC--CCCCHHHHHHHHHCCCCCCCCEEEEE
Q ss_conf             2345564314854334234567777523455553011105664102454332--10000368999975996654148874
Q gi|254781172|r  199 LALNDEMIAVGRKPYANPRNAASGILRRLNPTDITRYLNFFVHGLGKTSEIF--AKGQYEMLQKMRCLGFPVNNGVRQAN  276 (731)
Q Consensus       199 ~~lN~~~~~~g~~~f~NpRN~aaG~lr~~d~~~~~r~L~f~ay~~~~~~~~~--~~~~~e~l~~L~~~GF~v~~~~~~~~  276 (731)
T Consensus        84 ~~lq~r-------------------~~~~---~~~~pv~y~vFDlL~l~G~~L~~~Pl~eRr~~L~~l~~~~-~~~~~~~  140 (269)
T PRK07636         84 EAVMER-------------------FQSR---KSFYPIVFCVFDVIRIEGVSVTAKPLSERKELLAGLKLDH-PNVKIIE  140 (269)
T ss_pred             HHHHHH-------------------HHCC---CCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCC-CCEEECC
T ss_conf             999754-------------------5405---8766359999957345864300378999999998643579-9658756


Q ss_pred             CCC-CHHHHHHHHHHHHCCCCCCCCCEEEEECCHHCCCCCCCCCCCCCCEE
Q ss_conf             032-11345566553100112343763777311000111587656866312
Q gi|254781172|r  277 TFH-GIVSYYNEMKSIRSTLPYDIDGLVYKVDEFSLQKQLGERARSPRWMI  326 (731)
Q Consensus       277 ~~~-~~~~~~~~~~~~r~~l~y~iDGiVikvn~~~~q~~lG~ts~~Prwai  326 (731)
T Consensus       141 ~~~~~~~~~~~~a~~------~glEGIvaKr~dS~Y~~----G~Rs~~WlK  181 (269)
T PRK07636        141 GVRGHATAYFELVKE------NKLEGIVIKQANSPYAI----NKRSDRWLK  181 (269)
T ss_pred             CCCCHHHHHHHHHHH------CCCCEEEECCCCCCCCC----CCCCCCEEE
T ss_conf             554519999999997------69924785179998679----998735089