HHsearch alignment for GI: 254781172 and conserved domain: PRK07956
>PRK07956 ligA NAD-dependent DNA ligase LigA; Validated.
Probab=100.00 E-value=0 Score=1659.17 Aligned_cols=666 Identities=42% Similarity=0.732 Sum_probs=637.3
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCEEECC
Q ss_conf 99999999999999999999843317798208789999999999998977203115899996200364323577504516
Q gi|254781172|r 13 SIEQARKELSSLEQEISYHDDCYYQYSKPIILDSEYDALKRRCDAIAHAFPDLARSEDPNGPLNKIGGEMNLSLFKVTHS 92 (731)
Q Consensus 13 s~~~~~~~i~~L~~~i~~~~~~Yy~~~~p~isD~eYD~L~~~L~~le~~~p~~~~~~~p~spt~~Vg~~~~~~~~kv~H~ 92 (731)
T Consensus 1 ~m~~~~~~i~~L~~~i~~~n~~YY~~~~p~isD~eYD~L~~eL~~lE~~~P~~~---~~~SPt~~VG~~~~~~f~kv~H~ 77 (668)
T PRK07956 1 TMEEAKKRIEELREELNHHAYAYYVLDNPEISDAEYDRLYRELLALEAEHPELI---TPDSPTQRVGGAPLDGFEKVRHL 77 (668)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC---CCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 977999999999999999999864389987888999999999999998690555---89998443366612478733689
Q ss_pred CCCCCHHHCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCEEEEEEEEECCEEEEEEECCCCHHHHHHHHHHHHHCC
Q ss_conf 64257021599999999999999861246777611999941581899999859989988865986556669997753102
Q gi|254781172|r 93 IPTLSLEKIWNIEDLRKFITRIYRFWQKKDDNSIFFTLEPKIDGTMITIRYEKGKFVYAALRGDGHSGEDVSACIRAIPT 172 (731)
Q Consensus 93 ~pMlSL~k~~~~~el~~w~~~~~~~~~~~~~~~~~~~vepKiDG~sisl~Y~~G~L~~a~TRGdG~~GeDVT~n~~~i~~ 172 (731)
T Consensus 78 ~pMlSL~k~~~~~el~~~~~r~~k~l~---~~~~~~~~epKiDGlsisL~Ye~G~L~~a~TRGdG~~GeDVT~nv~~I~~ 154 (668)
T PRK07956 78 VPMLSLDNAFSEEELRAFDKRVRKRLS---GPSLTYVCELKIDGLAVSLLYENGVLVRAATRGDGTTGEDITANVRTIRS 154 (668)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHCC---CCCCCEEEEEECCCEEEEEEEECCEEEEEECCCCCCCHHHHHHHHHHHCC
T ss_conf 877460133999999999999998618---88865798860461689999989999887615899731338788876526
Q ss_pred CCCCCCCCCCCEEEEEEEEEEECHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHH-HCCCEEEEEEECCCC-CCC
Q ss_conf 432233544550489999998520212345564314854334234567777523455553-011105664102454-332
Q gi|254781172|r 173 IPRVLSLNIPEIIEVRGEVYISKNDFLALNDEMIAVGRKPYANPRNAASGILRRLNPTDI-TRYLNFFVHGLGKTS-EIF 250 (731)
Q Consensus 173 iP~~l~~~~~~~ieiRGEv~m~~~~F~~lN~~~~~~g~~~f~NpRN~aaG~lr~~d~~~~-~r~L~f~ay~~~~~~-~~~ 250 (731)
T Consensus 155 iP~~l~~~~p~~leiRGEv~~~~~~F~~lN~~~~~~g~~~faNpRNaaAGslrqld~~~~~~R~L~~~~y~~~~~~~~~~ 234 (668)
T PRK07956 155 IPLRLQDNVPEVLEVRGEVFMPKADFEALNEERREAGEKPFANPRNAAAGSLRQLDPKITAKRPLSFFAYGVGVLEGGEL 234 (668)
T ss_pred CCCCCCCCCCCEEEEEEEEEEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHCCCCCEEEEEECCCCCCCCC
T ss_conf 64312246886599988999986689999899997178766784889877977589311203776699997013478888
Q ss_pred CCCCHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCHHCCCCCCCCCCCCCCEEEECC
Q ss_conf 10000368999975996654148874032113455665531001123437637773110001115876568663123114
Q gi|254781172|r 251 AKGQYEMLQKMRCLGFPVNNGVRQANTFHGIVSYYNEMKSIRSTLPYDIDGLVYKVDEFSLQKQLGERARSPRWMISHKF 330 (731)
Q Consensus 251 ~~~~~e~l~~L~~~GF~v~~~~~~~~~~~~~~~~~~~~~~~r~~l~y~iDGiVikvn~~~~q~~lG~ts~~PrwaiA~Kf 330 (731)
T Consensus 235 ~~t~~e~l~~l~~~GF~v~~~~~~~~~~~ev~~~~~~~~~~R~~l~y~iDGiViKvn~~~~q~~LG~tsk~PrwAiA~Kf 314 (668)
T PRK07956 235 PDSQSEALEFLKAWGFPVNPYTKLCSSIEEVLAFYEYIEEERHDLPYDIDGVVIKVDDLALQEELGFTSKAPRWAIAYKF 314 (668)
T ss_pred CCCHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHCCCCCCCCCEEEEECC
T ss_conf 66799999999977998886759958899999999999987751776667469995538878753976689780478747
Q ss_pred CCCEEEEEEEEEEEEECCCCEEEEEEEEEEEEECCCEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCH
Q ss_conf 56215899878899403562258999974333026400010148989997502345432224684407689998358702
Q gi|254781172|r 331 AEKQASTRLLDIDIQIGRTGILTPVARLEPVNIGGALITNATLHNEDYIKGLDASGKVMRGGRDIRVGDRVLVKRAGEVI 410 (731)
Q Consensus 331 ~~e~~~T~v~~I~wqvgRtG~itPva~~ePV~l~G~~V~ratlhN~~~I~~l~~~~~~~~~~~~I~iGd~V~I~RaGdVI 410 (731)
T Consensus 315 ~~e~~~T~l~~I~~qVGRTG~iTPvA~l~PV~l~G~~VsrATLHN~~~I~~-----------~~i~iGd~V~v~raGdVI 383 (668)
T PRK07956 315 PAEEATTKLLDIEVQVGRTGAVTPVARLEPVEVAGVTVSRATLHNADEIER-----------KDIRIGDTVVVRRAGDVI 383 (668)
T ss_pred CCCEEEEEEEEEEEEECCCCEEEEEEEEEEEEECCEEEEECCCCCHHHHHH-----------CCCCCCCEEEEEECCCCC
T ss_conf 736799997777997347635626999987871560675236478899997-----------078999989999888887
Q ss_pred HHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHH
Q ss_conf 56654101235787304777043265775010337865445210100354344114466553321301231035410355
Q gi|254781172|r 411 PKVVDIIVNERHPDAQPFSFPSFCPICQSRVVRDLNPKTGKLVAAHRCTGGLACSAQQLERLKHFVSRDAFNIEGLGKQQ 490 (731)
Q Consensus 411 P~I~~Vi~~~r~~~~~~~~~P~~CP~Cgs~l~~~~~~~~~~~~~~~rC~n~~~Cpaq~~~~i~hF~SK~aldI~GLG~k~ 490 (731)
T Consensus 384 P~I~~v~~~~r~~~~~~~~~P~~CP~C~s~l~~~~~~------~~~~C~N~~~Cpaq~~~~i~hF~Sr~amdI~GlG~~~ 457 (668)
T PRK07956 384 PEVVGVVLEKRPGDEREIVMPTHCPVCGSELVREEGE------AVLRCTNGLSCPAQLKERLIHFVSRNAMDIDGLGEKI 457 (668)
T ss_pred CCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCC------EEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHH
T ss_conf 2004641301899887543677876779857993696------3787789989989999988865244531646659999
Q ss_pred HHHHHCCCCCCEEEEEHHHHCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
Q ss_conf 55653057654045410110106777531000100013421001456899998752234666776301011116899999
Q gi|254781172|r 491 LDFFFKSEDPAFSIRIPADIFTLQRRQQTSTTKIENILGFGDVSVTNLYDSINKRRNISLERFIFSLGIRHVGAEIARSL 570 (731)
Q Consensus 491 Ie~L~e~~~~~g~I~~~~DLy~L~~~~~~~~~~l~~l~GfgeKsa~nL~~sIe~sK~~~L~r~L~ALGI~~vG~~~Ak~L 570 (731)
T Consensus 458 i~~L~~~----g~i~~~~Diy~L~~~------~L~~l~gfgeKsa~nLl~aIe~SK~~~l~r~L~ALGI~~VG~~~Ak~L 527 (668)
T PRK07956 458 IEQLFEK----GLIHTPADLFKLTEE------DLLQLEGFGEKSAQNLLDAIEKSKETPLARFLYALGIRHVGEKAAKAL 527 (668)
T ss_pred HHHHHHC----CCCCCHHHHHCCCHH------HHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHH
T ss_conf 9999876----876658999728854------540212355669999999999854775888998627864129999999
Q ss_pred HHHCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 98829989999978977612511778761388867899999999966979999999999733877654322468821686
Q gi|254781172|r 571 AKYYLSYQNFAQEINNIIAHNNDDWLSLIRVPLVGDIIAQAIVEFYQNPRNICAVEALLKEVSPSIGRHEKNVSSEIENK 650 (731)
Q Consensus 571 a~~f~si~~l~~~~~~~~~~~~~~~e~L~~I~GiG~~~A~si~~ff~~~~n~~~i~~L~~~~~~~~~~~~~~~~~~l~gk 650 (731)
T Consensus 528 a~~f~sl~~l~~a----------s~e~L~~I~giG~~~A~si~~ff~~~~n~~~i~~L~~~g~~~~~~~~~~~~~~l~Gk 597 (668)
T PRK07956 528 ARHFGSLEALEAA----------SEEELAAVEGIGEEVAQSIVEFFAVEHNRELIDELLEEGLGPEDEKEEAADSPLAGK 597 (668)
T ss_pred HHHHCCHHHHHHC----------CHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
T ss_conf 9996689999708----------999985768844999999999970976899999999837986655444668865898
Q ss_pred EEEEECCCCCCCHHHHHHHHHHCCCEEEEEEECCEEEEEECCCCCCHHHHHHHCCCEEECHHHHHHHHHHH
Q ss_conf 69997258899878999999982984998111632179977888863798997499173799999999882
Q gi|254781172|r 651 KLVFTGTLQKIQRHKAQEYVTQLGAVVSAILSRKTDIIIVGDNPGSKLEKAQQLGVKIMNEEQFLFLLQQY 721 (731)
Q Consensus 651 ~vV~TGtl~~~~R~e~~~~ie~~Ggkv~sSVSkkT~~LI~ge~~gSKl~KA~~LgI~Ii~e~ef~~ll~~~ 721 (731)
T Consensus 598 t~ViTGtl~~~sR~e~k~~ie~~Ggkv~sSVSkkTd~LV~Ge~~GSKl~KA~~LGI~Ii~E~ef~~ll~~g 668 (668)
T PRK07956 598 TVVLTGTLEQLSRDEAKEKLEALGAKVSGSVSKKTDYVVAGEAAGSKLAKAQELGVKVLDEEEFLRLLGEG 668 (668)
T ss_pred EEEEEECCCCCCHHHHHHHHHHCCCEECCCCCCCCEEEEECCCCCCHHHHHHHCCCEEECHHHHHHHHHCC
T ss_conf 89998069998989999999987999946401675299988998858999998699083499999998478