HHsearch alignment for GI: 254781172 and conserved domain: PRK13766
>PRK13766 Hef nuclease; Provisional.
Probab=97.78 E-value=4.2e-05 Score=58.62 Aligned_cols=52 Identities=25% Similarity=0.264 Sum_probs=46.8
Q ss_pred CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHCCH
Q ss_conf 10111168999999882998999997897761251177876138886789999999996697
Q gi|254781172|r 558 GIRHVGAEIARSLAKYYLSYQNFAQEINNIIAHNNDDWLSLIRVPLVGDIIAQAIVEFYQNP 619 (731)
Q Consensus 558 GI~~vG~~~Ak~La~~f~si~~l~~~~~~~~~~~~~~~e~L~~I~GiG~~~A~si~~ff~~~ 619 (731)
T Consensus 710 ~~pgvg~~~a~~ll~~fgsi~~i~~----------a~~~eL~~v~giG~~~A~~i~~~~~~~ 761 (764)
T PRK13766 710 SLPDVGPVLARNLLDHFGSVENVMT----------ASEEELKAVEGIGEKTAKKIREVVTSE 761 (764)
T ss_pred HCCCCCHHHHHHHHHHCCCHHHHHC----------CCHHHHHHCCCCCHHHHHHHHHHHCCC
T ss_conf 3899999999999997199999965----------999999547496999999999985251