HHsearch alignment for GI: 254781172 and conserved domain: cd00008

>cd00008 53EXOc 5'-3' exonuclease; T5 type 5'-3' exonuclease domains may co-occur with DNA polymerase I (Pol I) domains, or be part of Pol I containing complexes. They digest dsDNA and ssDNA, releasing mono-,di- and tri-nucleotides, as well as oligonucleotides, and have also been reported to possess RNase H activity. Also called 5' nuclease family, involved in structure-specific cleavage of flaps formed by Pol I activity (similar to mammalian flap endonuclease I, FEN-1). A single nucleic acid strand may be threaded through the 5' nuclease enzyme before cleavage occurs. The domain binds two divalent metal ions which are necessary for activity.
Probab=93.41  E-value=0.2  Score=30.28  Aligned_cols=29  Identities=24%  Similarity=0.412  Sum_probs=24.3

Q ss_conf             01011116899999988299899999789
Q gi|254781172|r  557 LGIRHVGAEIARSLAKYYLSYQNFAQEIN  585 (731)
Q Consensus       557 LGI~~vG~~~Ak~La~~f~si~~l~~~~~  585 (731)
T Consensus       186 pGV~GiG~KtA~kLl~~~gsle~i~~~~~  214 (240)
T cd00008         186 PGVPGIGEKTAAKLLKEYGSLEGILENLD  214 (240)
T ss_conf             99998578999999998099999998298