HHsearch alignment for GI: 254781172 and conserved domain: cd00056
>cd00056 ENDO3c endonuclease III; includes endonuclease III (DNA-(apurinic or apyrimidinic site) lyase), alkylbase DNA glycosidases (Alka-family) and other DNA glycosidases.
Probab=90.51 E-value=0.86 Score=25.28 Aligned_cols=24 Identities=29% Similarity=0.397 Sum_probs=20.3
Q ss_pred CCHHHHHCCCCCCHHHHHHHHHHH
Q ss_conf 177876138886789999999996
Q gi|254781172|r 593 DDWLSLIRVPLVGDIIAQAIVEFY 616 (731)
Q Consensus 593 ~~~e~L~~I~GiG~~~A~si~~ff 616 (731)
T Consensus 80 ~~~~~L~~l~GIG~~TA~~vl~~~ 103 (158)
T cd00056 80 DAREELLALPGVGRKTANVVLLFA 103 (158)
T ss_pred HHHHHHHCCCCCCHHHHHHHHHHH
T ss_conf 899998758982899999999998