HHsearch alignment for GI: 254781172 and conserved domain: pfam03120

>pfam03120 DNA_ligase_OB NAD-dependent DNA ligase OB-fold domain. DNA ligases catalyse the crucial step of joining the breaks in duplex DNA during DNA replication, repair and recombination, utilising either ATP or NAD(+) as a cofactor. This family is a small domain found after the adenylation domain pfam01653 in NAD dependent ligases. OB-fold domains generally are involved in nucleic acid binding.
Probab=99.91  E-value=1.3e-24  Score=209.54  Aligned_cols=82  Identities=55%  Similarity=0.973  Sum_probs=78.7

Q ss_pred             EEEEEEEEEEEECCCCEEEEEEEEEEEEECCCEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHH
Q ss_conf             58998788994035622589999743330264000101489899975023454322246844076899983587025665
Q gi|254781172|r  335 ASTRLLDIDIQIGRTGILTPVARLEPVNIGGALITNATLHNEDYIKGLDASGKVMRGGRDIRVGDRVLVKRAGEVIPKVV  414 (731)
Q Consensus       335 ~~T~v~~I~wqvgRtG~itPva~~ePV~l~G~~V~ratlhN~~~I~~l~~~~~~~~~~~~I~iGd~V~I~RaGdVIP~I~  414 (731)
T Consensus         1 A~T~v~~I~~~vgRtG~itPva~~ePV~l~G~~V~~atlhN~~~i~~~-----------~i~~Gd~V~I~raGdVIP~I~   69 (82)
T pfam03120         1 AVTKLLDIEVQVGRTGVITPVAILEPVELAGTTVSRATLHNEDEIEEK-----------DIRIGDTVVVRKAGDVIPKIV   69 (82)
T ss_pred             CEEEEEEEEEECCCCEEEEEEEEEEEEEECCEEEEEEECCCHHHHHHC-----------CCCCCCEEEEEECCCCCCCEE
T ss_conf             958999999955887088699999989989999999975798998645-----------999899999999788766673


Q ss_pred             HHCCCCCCCCCCE
Q ss_conf             4101235787304
Q gi|254781172|r  415 DIIVNERHPDAQP  427 (731)
Q Consensus       415 ~Vi~~~r~~~~~~  427 (731)
T Consensus        70 ~Vi~~~R~~~~~p   82 (82)
T pfam03120        70 GVVLEKRPGDTRP   82 (82)
T ss_pred             EEEHHHCCCCCCC
T ss_conf             8786238998999