HHsearch alignment for GI: 254781172 and conserved domain: smart00292
>smart00292 BRCT breast cancer carboxy-terminal domain.
Probab=98.46 E-value=1.4e-06 Score=70.00 Aligned_cols=76 Identities=34% Similarity=0.479 Sum_probs=67.4
Q ss_pred CCCCCCEEEEECCCCCCCHHHHHHHHHHCCCEEEEEEEC-CEEEEEECCCCCCH--HHHHHHCCCEEECHHHHHHHHHH
Q ss_conf 821686699972588998789999999829849981116-32179977888863--79899749917379999999988
Q gi|254781172|r 645 SEIENKKLVFTGTLQKIQRHKAQEYVTQLGAVVSAILSR-KTDIIIVGDNPGSK--LEKAQQLGVKIMNEEQFLFLLQQ 720 (731)
Q Consensus 645 ~~l~gk~vV~TGtl~~~~R~e~~~~ie~~Ggkv~sSVSk-kT~~LI~ge~~gSK--l~KA~~LgI~Ii~e~ef~~ll~~ 720 (731)
T Consensus 1 ~~f~~~~~~i~g~~~~~~~~~l~~~i~~~Gg~v~~~~~~~~~th~I~~~~~~~~~~~~~~~~~~~~iV~~~Wi~~c~~~ 79 (80)
T smart00292 1 KLFKGKVFVITGKFDKNERDELKELIEALGGKVTSSLSSKTTTHVIVGSPEGGKLELLLAIALGIPIVTEDWLLDCLKA 79 (80)
T ss_pred CCCCCCEEEEEEECCCCCHHHHHHHHHHHCCEECCCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCEECHHHHHHHHHC
T ss_conf 9579989999861698899999999998399250432577507999837988607789999809928759999999977