HHsearch alignment for GI: 254781172 and conserved domain: smart00475

>smart00475 53EXOc 5'-3' exonuclease.
Probab=93.54  E-value=0.11  Score=32.12  Aligned_cols=42  Identities=17%  Similarity=0.353  Sum_probs=30.7

Q ss_pred             CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHH
Q ss_conf             01011116899999988299899999789776125117787613888678999999999
Q gi|254781172|r  557 LGIRHVGAEIARSLAKYYLSYQNFAQEINNIIAHNNDDWLSLIRVPLVGDIIAQAIVEF  615 (731)
Q Consensus       557 LGI~~vG~~~Ak~La~~f~si~~l~~~~~~~~~~~~~~~e~L~~I~GiG~~~A~si~~f  615 (731)
T Consensus       189 pGV~GIG~KtA~kLL~~ygsle~i~~~~d~-----------------i~~k~~~~l~~~  230 (259)
T smart00475      189 PGVPGIGEKTAAKLLKEFGSLENILENLDK-----------------LKKKLREKLLAH  230 (259)
T ss_pred             CCCCCCCHHHHHHHHHHCCCHHHHHHHHHH-----------------CCHHHHHHHHHH
T ss_conf             999984789999999983999999983985-----------------488999999977