HHsearch results for GI: 254781172 and protein with PDBid: 1cdz_A

>1cdz_A Protein (DNA-repair protein XRCC1); BRCT, BRCA1, protein-protein interaction, DNA binding protein; 3.20A {Homo sapiens} SCOP: c.15.1.1

Probab=98.26  E-value=1.4e-06  Score=68.37  Aligned_cols=79  Identities=14%  Similarity=0.209  Sum_probs=68.7

Q ss_pred             CCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCEEEEEEECCEEEEEECCCCCCHHHHHHH--CCCEEECHHHHHHHHHHH
Q ss_conf             882168669997258899878999999982984998111632179977888863798997--499173799999999882
Q gi|254781172|r  644 SSEIENKKLVFTGTLQKIQRHKAQEYVTQLGAVVSAILSRKTDIIIVGDNPGSKLEKAQQ--LGVKIMNEEQFLFLLQQY  721 (731)
Q Consensus       644 ~~~l~gk~vV~TGtl~~~~R~e~~~~ie~~Ggkv~sSVSkkT~~LI~ge~~gSKl~KA~~--LgI~Ii~e~ef~~ll~~~  721 (731)
                      ...|.|..|+++|.+++..|+.++++|.++||+++++.+++|+++|+.+..+.|.++|..  .+++|++.+.+.+-+++.
T Consensus         3 p~~F~g~~f~i~g~~~~~~~~~L~~~i~~~GG~~~~~~~~~~ThlI~~~~~~~k~~~~~~~~~~i~iV~~~Wi~~c~~~~   82 (96)
T 1cdz_A            3 PDFFQGKHFFLYGEFPGDERRKLIRYVTAFNGELEDYMSDRVQFVITAQEWDPSFEEALMDNPSLAFVRPRWIYSCNEKQ   82 (96)
T ss_dssp             CCTTTTCEEEECSCCCTHHHHHHHHHHHHTTCEECSSCSTTCSEEECSSCCCHHHHHHHTTCTTCEEECTHHHHHHHTTT
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCEEECCCCCCCEEEEEECCCHHHHHHHHHHCCCCEEEEHHHHHHHHHCC
T ss_conf             32019928999478785899999999986898995546887029998168605789999777998697279999999839


Q ss_pred             C
Q ss_conf             8
Q gi|254781172|r  722 N  722 (731)
Q Consensus       722 ~  722 (731)
                      .
T Consensus        83 ~   83 (96)
T 1cdz_A           83 K   83 (96)
T ss_dssp             S
T ss_pred             C
T ss_conf             8