HHsearch results for GI: 254781172 and protein with PDBid: 1cuk_A
>1cuk_A RUVA protein; DNA repair, SOS response, DNA-binding, DNA recombination, helicase; 1.90A {Escherichia coli} SCOP: a.5.1.1 a.60.2.1 b.40.4.2 PDB: 1hjp_A 1bdx_A* 1c7y_A 1d8l_A
Probab=96.40 E-value=0.0096 Score=38.71 Aligned_cols=72 Identities=18% Similarity=0.393 Sum_probs=53.3
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHCC
Q ss_conf 01000134210014568999987522346667763010111168999999882998999997897761251177876138
Q gi|254781172|r 522 TKIENILGFGDVSVTNLYDSINKRRNISLERFIFSLGIRHVGAEIARSLAKYYLSYQNFAQEINNIIAHNNDDWLSLIRV 601 (731)
Q Consensus 522 ~~l~~l~GfgeKsa~nL~~sIe~sK~~~L~r~L~ALGI~~vG~~~Ak~La~~f~si~~l~~~~~~~~~~~~~~~e~L~~I 601 (731)
++-..|-||..+.-..++..+ +++.|||.++|-.|...+ +.+.+..++. +.+...|..+
T Consensus 55 Ed~~~LyGF~~~~Er~lF~~L--------------i~VsGIGPK~AL~ILs~~-~~~~l~~aI~------~~D~~~L~~v 113 (203)
T 1cuk_A 55 EDAQLLYGFNNKQERTLFKEL--------------IKTNGVGPKLALAILSGM-SAQQFVNAVE------REEVGALVKL 113 (203)
T ss_dssp TTEEEEEEESSHHHHHHHHHH--------------HHSSSCCHHHHHHHHHHS-CHHHHHHHHH------TTCHHHHHTS
T ss_pred CCCCEEEECCCHHHHHHHHHH--------------HCCCCCCHHHHHHHHHCC-CHHHHHHHHH------HCCHHHHHCC
T ss_conf 677468861946999999998--------------576885756688886127-9899999987------1899886069
Q ss_pred CCCCHHHHHHHHH
Q ss_conf 8867899999999
Q gi|254781172|r 602 PLVGDIIAQAIVE 614 (731)
Q Consensus 602 ~GiG~~~A~si~~ 614 (731)
+|||+|+|+.|+-
T Consensus 114 pGIGkKtA~rIil 126 (203)
T 1cuk_A 114 PGIGKKTAERLIV 126 (203)
T ss_dssp TTCCHHHHHHHHH
T ss_pred CCCCHHHHHHHHH
T ss_conf 9877999999999