HHsearch results for GI: 254781172 and protein with PDBid: 1imo_A
>1imo_A DNA ligase III; parallel beta sheet; HET: DNA; NMR {Homo sapiens} SCOP: c.15.1.2 PDB: 1in1_A*
Probab=94.31 E-value=0.054 Score=32.91 Aligned_cols=75 Identities=5% Similarity=0.087 Sum_probs=59.2
Q ss_pred CCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCEEEEEEE-CCEEEEEECCCCCCHHHHHHHCCCEEECHHHHHHH
Q ss_conf 32246882168669997258899878999999982984998111-63217997788886379899749917379999999
Q gi|254781172|r 639 HEKNVSSEIENKKLVFTGTLQKIQRHKAQEYVTQLGAVVSAILS-RKTDIIIVGDNPGSKLEKAQQLGVKIMNEEQFLFL 717 (731)
Q Consensus 639 ~~~~~~~~l~gk~vV~TGtl~~~~R~e~~~~ie~~Ggkv~sSVS-kkT~~LI~ge~~gSKl~KA~~LgI~Ii~e~ef~~l 717 (731)
+.+.....|.|.+|.+.|+.+ +|++++.+|.++||.+....+ +.++++|+......| .+++..+.+.+-
T Consensus 9 ~~k~L~diF~G~~iyi~~~~p--~~~~L~r~i~a~GG~~~~~~~~~~vTHiI~~~~~~~~--------~~~V~p~WI~dc 78 (88)
T 1imo_A 9 QTKVLLDIFTGVRLYLPPSTP--DFSRLRRYFVAFDGDLVQEFDMTSATHVLGSRDKNPA--------AQQVSPEWIWAC 78 (88)
T ss_dssp STTCCCSSSTTCBCCCCTTST--THHHHHHHHHHHTCBCCCTTCCTTCCCEESCCTTCTT--------SCEECHHHHHHH
T ss_pred CCCCCCHHHCCEEEEECCCCC--CHHHHHHHHHHCCCEEEEECCCCCCEEEEECCCCCCC--------CEEECHHHHHHH
T ss_conf 335361133896999799999--6899999999829988523367881499971788888--------579724999999
Q ss_pred HHHHCC
Q ss_conf 988286
Q gi|254781172|r 718 LQQYNT 723 (731)
Q Consensus 718 l~~~~~ 723 (731)
+++..-
T Consensus 79 i~~~kL 84 (88)
T 1imo_A 79 IRKRRL 84 (88)
T ss_dssp HHHTSC
T ss_pred HHCCCC
T ss_conf 873786