HHsearch results for GI: 254781172 and protein with PDBid: 1imo_A

>1imo_A DNA ligase III; parallel beta sheet; HET: DNA; NMR {Homo sapiens} SCOP: c.15.1.2 PDB: 1in1_A*
Probab=94.31  E-value=0.054  Score=32.91  Aligned_cols=75  Identities=5%  Similarity=0.087  Sum_probs=59.2

Q ss_pred             CCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCEEEEEEE-CCEEEEEECCCCCCHHHHHHHCCCEEECHHHHHHH
Q ss_conf             32246882168669997258899878999999982984998111-63217997788886379899749917379999999
Q gi|254781172|r  639 HEKNVSSEIENKKLVFTGTLQKIQRHKAQEYVTQLGAVVSAILS-RKTDIIIVGDNPGSKLEKAQQLGVKIMNEEQFLFL  717 (731)
Q Consensus       639 ~~~~~~~~l~gk~vV~TGtl~~~~R~e~~~~ie~~Ggkv~sSVS-kkT~~LI~ge~~gSKl~KA~~LgI~Ii~e~ef~~l  717 (731)
                      +.+.....|.|.+|.+.|+.+  +|++++.+|.++||.+....+ +.++++|+......|        .+++..+.+.+-
T Consensus         9 ~~k~L~diF~G~~iyi~~~~p--~~~~L~r~i~a~GG~~~~~~~~~~vTHiI~~~~~~~~--------~~~V~p~WI~dc   78 (88)
T 1imo_A            9 QTKVLLDIFTGVRLYLPPSTP--DFSRLRRYFVAFDGDLVQEFDMTSATHVLGSRDKNPA--------AQQVSPEWIWAC   78 (88)
T ss_dssp             STTCCCSSSTTCBCCCCTTST--THHHHHHHHHHHTCBCCCTTCCTTCCCEESCCTTCTT--------SCEECHHHHHHH
T ss_pred             CCCCCCHHHCCEEEEECCCCC--CHHHHHHHHHHCCCEEEEECCCCCCEEEEECCCCCCC--------CEEECHHHHHHH
T ss_conf             335361133896999799999--6899999999829988523367881499971788888--------579724999999


Q ss_pred             HHHHCC
Q ss_conf             988286
Q gi|254781172|r  718 LQQYNT  723 (731)
Q Consensus       718 l~~~~~  723 (731)
                      +++..-
T Consensus        79 i~~~kL   84 (88)
T 1imo_A           79 IRKRRL   84 (88)
T ss_dssp             HHHTSC
T ss_pred             HHCCCC
T ss_conf             873786