HHsearch results for GI: 254781172 and protein with PDBid: 1jms_A
>1jms_A Terminal deoxynucleotidyltransferase; polymerase; 2.36A {Mus musculus} SCOP: a.60.6.1 a.60.12.1 d.218.1.2 PDB: 1kdh_A* 1kej_A*
Probab=95.30 E-value=0.022 Score=35.89 Aligned_cols=95 Identities=8% Similarity=0.034 Sum_probs=54.7
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHCCCCCHHHHHCCCCCC
Q ss_conf 34210014568999987522346667763010111168999999882--9989999978977612511778761388867
Q gi|254781172|r 528 LGFGDVSVTNLYDSINKRRNISLERFIFSLGIRHVGAEIARSLAKYY--LSYQNFAQEINNIIAHNNDDWLSLIRVPLVG 605 (731)
Q Consensus 528 ~GfgeKsa~nL~~sIe~sK~~~L~r~L~ALGI~~vG~~~Ak~La~~f--~si~~l~~~~~~~~~~~~~~~e~L~~I~GiG 605 (731)
+.|...+-.+-..+|+.-. .++...=-..+|||||.+++..|.... +++..+....... ......+|++|+|||
T Consensus 55 d~fr~~AY~rAa~~i~~l~-~~i~~~~~l~~ipGIG~~i~~kI~Eil~tG~l~~le~l~~~~---~~~~l~~l~~I~GiG 130 (381)
T 1jms_A 55 NEGSCLAFMRASSVLKSLP-FPITSMKDTEGIPCLGDKVKSIIEGIIEDGESSEAKAVLNDE---RYKSFKLFTSVFGVG 130 (381)
T ss_dssp CHHHHHHHHHHHHHHHTCS-SCCCSGGGGTTCSSCCHHHHHHHHHHHHHSSCHHHHHHHHCH---HHHHHHHHHTSTTCC
T ss_pred CCHHHHHHHHHHHHHHHCC-CCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCC---CCHHHHHHHHCCCCC
T ss_conf 8087999999999998589-777999998369995199999999999849858899987015---336889987377878
Q ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHH
Q ss_conf 89999999996697999999999973
Q gi|254781172|r 606 DIIAQAIVEFYQNPRNICAVEALLKE 631 (731)
Q Consensus 606 ~~~A~si~~ff~~~~n~~~i~~L~~~ 631 (731)
+++|..+.+- .+..+++|.+.
T Consensus 131 pk~a~~l~~~-----Gi~tl~dL~~~ 151 (381)
T 1jms_A 131 LKTAEKWFRM-----GFRTLSKIQSD 151 (381)
T ss_dssp HHHHHHHHHT-----TCCSHHHHHHC
T ss_pred HHHHHHHHHC-----CCCCHHHHHHH
T ss_conf 9999999986-----97779998541