HHsearch results for GI: 254781172 and protein with PDBid: 1l0b_A
>1l0b_A BRCA1; TANDEM-BRCT, three-helix bundle, unknown function; 2.30A {Rattus norvegicus} SCOP: c.15.1.3 c.15.1.3
Probab=97.42 E-value=0.00059 Score=48.07 Aligned_cols=79 Identities=13% Similarity=0.120 Sum_probs=57.4
Q ss_pred CCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCEEEEEEECC----EE--EEEECCC----CCCHHHHHHHCCCEEECHHH
Q ss_conf 88216866999725889987899999998298499811163----21--7997788----88637989974991737999
Q gi|254781172|r 644 SSEIENKKLVFTGTLQKIQRHKAQEYVTQLGAVVSAILSRK----TD--IIIVGDN----PGSKLEKAQQLGVKIMNEEQ 713 (731)
Q Consensus 644 ~~~l~gk~vV~TGtl~~~~R~e~~~~ie~~Ggkv~sSVSkk----T~--~LI~ge~----~gSKl~KA~~LgI~Ii~e~e 713 (731)
...+.|..+++.|.+..-.+++++.+|+..||++....... +. .+++.+. ...+..-|.+.+++|++.+.
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~Gg~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~iV~~~W 194 (229)
T 1l0b_A 115 EKLFEGLQIYCCEPFTNMPKDELERMLQLCGASVVKELPLLTRDTGAHPIVLVQPSAWTEDNDCPDIGQLCKGRLVMWDW 194 (229)
T ss_dssp --CCTTCEEEECSCCSSSCHHHHHHHHHHTTCEEECSSSCGGGCCSSCCEEEEC-------------------CEEETHH
T ss_pred CCCCCCCCEECCCCCCCCCHHHHHHHHHHCCCEEECCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEHHH
T ss_conf 43237861132587778789999999998698885226643457773279996577420147999999975995970999
Q ss_pred HHHHHHHHC
Q ss_conf 999998828
Q gi|254781172|r 714 FLFLLQQYN 722 (731)
Q Consensus 714 f~~ll~~~~ 722 (731)
+.+=|..+.
T Consensus 195 l~dsi~~~~ 203 (229)
T 1l0b_A 195 VLDSISVYR 203 (229)
T ss_dssp HHHHHHTTS
T ss_pred HHHHHHHCC
T ss_conf 999999498