HHsearch results for GI: 254781172 and protein with PDBid: 1l0b_A

>1l0b_A BRCA1; TANDEM-BRCT, three-helix bundle, unknown function; 2.30A {Rattus norvegicus} SCOP: c.15.1.3 c.15.1.3
Probab=94.29  E-value=0.1  Score=30.75  Aligned_cols=68  Identities=13%  Similarity=0.197  Sum_probs=30.6

Q ss_pred             CCEEEEECCCCCCC---HHHHHHHHHHCCCEEEEEEECCEEEEEECCCC------CCHHHHHHHCCCEEECHHHHHHHHH
Q ss_conf             86699972588998---78999999982984998111632179977888------8637989974991737999999998
Q gi|254781172|r  649 NKKLVFTGTLQKIQ---RHKAQEYVTQLGAVVSAILSRKTDIIIVGDNP------GSKLEKAQQLGVKIMNEEQFLFLLQ  719 (731)
Q Consensus       649 gk~vV~TGtl~~~~---R~e~~~~ie~~Ggkv~sSVSkkT~~LI~ge~~------gSKl~KA~~LgI~Ii~e~ef~~ll~  719 (731)
                      +.+||+||    |+   ++.++++++.+||+++.+++..|++||+....      .-|+..|...|++|++.+.+.+-++
T Consensus         7 ~~~i~~sg----~~~~~~~~l~~~~~~~Gg~~~~~~~~~~THlI~~~~~~~~~~RT~K~l~A~~~g~~IVs~~Wl~~c~~   82 (229)
T 1l0b_A            7 DISMVVSG----LTPKEVMIVQKFAEKYRLALTDVITEETTHVIIKTDAEFVCERTLKYFLGIAGGKWIVSYSWVIKSIQ   82 (229)
T ss_dssp             CCEEEEES----CCHHHHHHHHHHHHHTTCEECSSCCSSCCEEEECBCTTSEECCCHHHHHHHHTTCEEEETHHHHHHHT
T ss_pred             CEEEEECC----CCHHHHHHHHHHHHHCCCEEECCCCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCEEEHHHHHHHHH
T ss_conf             86999918----99899999999999879999485599970899688876432244999999984996860799999998


Q ss_pred             H
Q ss_conf             8
Q gi|254781172|r  720 Q  720 (731)
Q Consensus       720 ~  720 (731)
                      .
T Consensus        83 ~   83 (229)
T 1l0b_A           83 E   83 (229)
T ss_dssp             T
T ss_pred             H
T ss_conf             3