HHsearch results for GI: 254781172 and protein with PDBid: 1wf6_A

>1wf6_A Similar to S.pombe -RAD4+/CUT5+product (A40727); BRCT, topoisomerase II binding protein, checkpoint; NMR {Homo sapiens} SCOP: c.15.1.5

Probab=98.30  E-value=2.7e-06  Score=66.11  Aligned_cols=80  Identities=13%  Similarity=0.145  Sum_probs=67.7

Q ss_pred             CCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCEEEEEEECCEEEEEECCCCCCH--HHHHHHCCCEEECHHHHHHHHHH
Q ss_conf             6882168669997258899878999999982984998111632179977888863--79899749917379999999988
Q gi|254781172|r  643 VSSEIENKKLVFTGTLQKIQRHKAQEYVTQLGAVVSAILSRKTDIIIVGDNPGSK--LEKAQQLGVKIMNEEQFLFLLQQ  720 (731)
Q Consensus       643 ~~~~l~gk~vV~TGtl~~~~R~e~~~~ie~~Ggkv~sSVSkkT~~LI~ge~~gSK--l~KA~~LgI~Ii~e~ef~~ll~~  720 (731)
                      ....|.|.+|+||| |..-.|..++.+|+.+||++...+++++++||+++..+.|  ..+|...+|+|++++.+.+=+++
T Consensus        37 ~~~if~G~~i~~sG-~~~~~~~~l~~li~~~GG~~~~~l~~~~THvI~~~~~~~~~~~~~a~~~~i~IV~~~Wi~dc~~~  115 (132)
T 1wf6_A           37 PEDLLDGCRIYLCG-FSGRKLDKLRRLINSGGGVRFNQLNEDVTHVIVGDYDDELKQFWNKSAHRPHVVGAKWLLECFSK  115 (132)
T ss_dssp             CTTTTTTCEEEEES-CCSHHHHHHHHHHHHTTCEEESSCCSSCCEEEESSCCSHHHHHHHHSCCCCCEEEHHHHHHHHHH
T ss_pred             HHHHCCCEEEEEEC-CCCHHHHHHHHHHHHCCCEEEEECCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCHHHHHHHHHC
T ss_conf             67751980899979-98077999999999889999500278742798617998529999985599782899999999984


Q ss_pred             HCC
Q ss_conf             286
Q gi|254781172|r  721 YNT  723 (731)
Q Consensus       721 ~~~  723 (731)
                      ...
T Consensus       116 ~~~  118 (132)
T 1wf6_A          116 GYM  118 (132)
T ss_dssp             SSC
T ss_pred             CCC
T ss_conf             985