HHsearch results for GI: 254781172 and protein with PDBid: 1x2i_A
>1x2i_A HEF helicase/nuclease; alpha helix, helix-hairpin-helix DNA binding domain, homodimer, hydrolase; 1.45A {Pyrococcus furiosus} SCOP: a.60.2.5
Probab=98.72 E-value=6.9e-09 Score=86.20 Aligned_cols=70 Identities=27% Similarity=0.310 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHCCHHH
Q ss_conf 875223466677630-1011116899999988299899999789776125117787613888678999999999669799
Q gi|254781172|r 543 NKRRNISLERFIFSL-GIRHVGAEIARSLAKYYLSYQNFAQEINNIIAHNNDDWLSLIRVPLVGDIIAQAIVEFYQNPRN 621 (731)
Q Consensus 543 e~sK~~~L~r~L~AL-GI~~vG~~~Ak~La~~f~si~~l~~~~~~~~~~~~~~~e~L~~I~GiG~~~A~si~~ff~~~~n 621 (731)
|+++.....+.++.| ||||||..+|+.|+++|++++.+..+ +.++|..|+|||+++|++|.+||+.++|
T Consensus 2 ekk~~~~~~~~~~~L~~IpgIG~~~a~~L~~~F~s~~~i~~A----------s~eeL~~v~GIG~~~a~~i~~~~~~~~~ 71 (75)
T 1x2i_A 2 EKKALTLAERQRLIVEGLPHVSATLARRLLKHFGSVERVFTA----------SVAELMKVEGIGEKIAKEIRRVITAPYI 71 (75)
T ss_dssp ---CCCHHHHHHHHHTTSTTCCHHHHHHHHHHHCSHHHHHHC----------CHHHHTTSTTCCHHHHHHHHHHHHSCCC
T ss_pred CCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHH----------HHHHHHHCCCCCHHHHHHHHHHHCCHHH
T ss_conf 967488999999998489994299999999996888989997----------8999985589799999999999857632
Q ss_pred H
Q ss_conf 9
Q gi|254781172|r 622 I 622 (731)
Q Consensus 622 ~ 622 (731)
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T Consensus 72 ~ 72 (75)
T 1x2i_A 72 E 72 (75)
T ss_dssp C
T ss_pred C
T ss_conf 0