HHsearch results for GI: 254781172 and protein with PDBid: 2dun_A

>2dun_A POL MU, DNA polymerase MU; layers A/B/A, parallel beta-sheet of 4 strands, non- homologous END jonting, somatic hypermutation, V(D)J recombination; HET: DNA; NMR {Homo sapiens} PDB: 2htf_A*
Probab=97.53  E-value=9.7e-05  Score=54.13  Aligned_cols=82  Identities=9%  Similarity=0.038  Sum_probs=68.2

Q ss_pred             CCCCCCCCCEEEEEC-CCCCCCHHHHHHHHHHCCCEEEEEEECCEEEEEECCCCCCHHHHHHH----------CCCEEEC
Q ss_conf             468821686699972-58899878999999982984998111632179977888863798997----------4991737
Q gi|254781172|r  642 NVSSEIENKKLVFTG-TLQKIQRHKAQEYVTQLGAVVSAILSRKTDIIIVGDNPGSKLEKAQQ----------LGVKIMN  710 (731)
Q Consensus       642 ~~~~~l~gk~vV~TG-tl~~~~R~e~~~~ie~~Ggkv~sSVSkkT~~LI~ge~~gSKl~KA~~----------LgI~Ii~  710 (731)
                      .....|.|.+|.|-| .+.+.+|+.++++++.+||++...+|..+++||+.+..++|...+.+          .+++|++
T Consensus         6 ~~~~~F~g~~i~i~~~~~~~~rr~~L~~li~~~Gg~v~~~~s~~vTHvI~~~~~~~k~~~~~~~~~~~~~~~~~~~~VV~   85 (133)
T 2dun_A            6 SGSTRFPGVAIYLVEPRMGRSRRAFLTGLARSKGFRVLDACSSEATHVVMEETSAEEAVSWQERRMAAAPPGCTPPALLD   85 (133)
T ss_dssp             CSSCSEEEEEEEECHHHHCSHHHHHHHHHHHHHTEEECSSCCTTCCEEEESSCCHHHHHHHHHHHHHHSCTTCCCCEEEE
T ss_pred             CCCCEECCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCEEEE
T ss_conf             99866289799997898888999999999998598997312788778996278728999999987653014578864974


Q ss_pred             HHHHHHHHHHHCC
Q ss_conf             9999999988286
Q gi|254781172|r  711 EEQFLFLLQQYNT  723 (731)
Q Consensus       711 e~ef~~ll~~~~~  723 (731)
                      .+.|.+=+++..-
T Consensus        86 ~~Wl~dCi~~gk~   98 (133)
T 2dun_A           86 ISWLTESLGAGQP   98 (133)
T ss_dssp             HHHHHHHHHHTSC
T ss_pred             HHHHHHHHHCCCC
T ss_conf             7999999985981