HHsearch results for GI: 254781172 and protein with PDBid: 2dun_A
>2dun_A POL MU, DNA polymerase MU; layers A/B/A, parallel beta-sheet of 4 strands, non- homologous END jonting, somatic hypermutation, V(D)J recombination; HET: DNA; NMR {Homo sapiens} PDB: 2htf_A*
Probab=97.53 E-value=9.7e-05 Score=54.13 Aligned_cols=82 Identities=9% Similarity=0.038 Sum_probs=68.2
Q ss_pred CCCCCCCCCEEEEEC-CCCCCCHHHHHHHHHHCCCEEEEEEECCEEEEEECCCCCCHHHHHHH----------CCCEEEC
Q ss_conf 468821686699972-58899878999999982984998111632179977888863798997----------4991737
Q gi|254781172|r 642 NVSSEIENKKLVFTG-TLQKIQRHKAQEYVTQLGAVVSAILSRKTDIIIVGDNPGSKLEKAQQ----------LGVKIMN 710 (731)
Q Consensus 642 ~~~~~l~gk~vV~TG-tl~~~~R~e~~~~ie~~Ggkv~sSVSkkT~~LI~ge~~gSKl~KA~~----------LgI~Ii~ 710 (731)
.....|.|.+|.|-| .+.+.+|+.++++++.+||++...+|..+++||+.+..++|...+.+ .+++|++
T Consensus 6 ~~~~~F~g~~i~i~~~~~~~~rr~~L~~li~~~Gg~v~~~~s~~vTHvI~~~~~~~k~~~~~~~~~~~~~~~~~~~~VV~ 85 (133)
T 2dun_A 6 SGSTRFPGVAIYLVEPRMGRSRRAFLTGLARSKGFRVLDACSSEATHVVMEETSAEEAVSWQERRMAAAPPGCTPPALLD 85 (133)
T ss_dssp CSSCSEEEEEEEECHHHHCSHHHHHHHHHHHHHTEEECSSCCTTCCEEEESSCCHHHHHHHHHHHHHHSCTTCCCCEEEE
T ss_pred CCCCEECCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCEEEE
T ss_conf 99866289799997898888999999999998598997312788778996278728999999987653014578864974
Q ss_pred HHHHHHHHHHHCC
Q ss_conf 9999999988286
Q gi|254781172|r 711 EEQFLFLLQQYNT 723 (731)
Q Consensus 711 e~ef~~ll~~~~~ 723 (731)
.+.|.+=+++..-
T Consensus 86 ~~Wl~dCi~~gk~ 98 (133)
T 2dun_A 86 ISWLTESLGAGQP 98 (133)
T ss_dssp HHHHHHHHHHTSC
T ss_pred HHHHHHHHHCCCC
T ss_conf 7999999985981