HHsearch results for GI: 254781172 and protein with PDBid: 2k6g_A
>2k6g_A Replication factor C subunit 1; protein, BRCT, DNA binding, activator, alternative splicing, ATP-binding, DNA replication, DNA- binding; NMR {Homo sapiens} PDB: 2k7f_A
Probab=99.81 E-value=1.5e-19 Score=168.65 Aligned_cols=82 Identities=33% Similarity=0.576 Sum_probs=77.6
Q ss_pred CCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCEEEEEEECCEEEEEECCCCC-CHHHHHHHCCCEEECHHHHHHHH
Q ss_conf 22468821686699972588998789999999829849981116321799778888-63798997499173799999999
Q gi|254781172|r 640 EKNVSSEIENKKLVFTGTLQKIQRHKAQEYVTQLGAVVSAILSRKTDIIIVGDNPG-SKLEKAQQLGVKIMNEEQFLFLL 718 (731)
Q Consensus 640 ~~~~~~~l~gk~vV~TGtl~~~~R~e~~~~ie~~Ggkv~sSVSkkT~~LI~ge~~g-SKl~KA~~LgI~Ii~e~ef~~ll 718 (731)
+...+++|.||+|||||+|+.|+|++++++|+.+||+|.+|||++|||||+|+++| ||++||++|||+||+|++|++||
T Consensus 26 p~~~~~~l~gk~~vfTG~l~~~~R~e~~~~i~~~Gg~v~~sVt~~t~~LV~G~~~g~sK~~kA~~lgI~Ii~E~~f~~ll 105 (109)
T 2k6g_A 26 PKGAENCLEGLIFVITGVLESIERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGTKIIDEDGLLNLI 105 (109)
T ss_dssp CCCCTTTTTTCEEEEESBCSSCCHHHHHHHHHHTTCEEESSCCTTCCEEEECBCCCHHHHHHHHHHTCEEECHHHHHHHH
T ss_pred CCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCEEECCCCCCCCEEEEECCCCHHHHHHHHHCCCCEECHHHHHHHH
T ss_conf 77899875898999924689988999999999879999176146656899818999799999998399682599999999
Q ss_pred HHH
Q ss_conf 882
Q gi|254781172|r 719 QQY 721 (731)
Q Consensus 719 ~~~ 721 (731)
++.
T Consensus 106 ~~~ 108 (109)
T 2k6g_A 106 RNL 108 (109)
T ss_dssp HHT
T ss_pred HHC
T ss_conf 856