HHsearch results for GI: 254781172 and protein with PDBid: 2xnk_A

>2xnk_A DNA topoisomerase 2-binding protein 1; phosphorylation, protein-protein interaction; HET: DNA; 2.60A {Homo sapiens} PDB: 2xnh_A*

Probab=98.13  E-value=4.4e-06  Score=64.53  Aligned_cols=80  Identities=20%  Similarity=0.227  Sum_probs=70.0

Q ss_pred             CCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCEEEEEEECCEEEEEECCCCCCHHHHHHHCCCEEECHHHHHHHHHHHC
Q ss_conf             68821686699972588998789999999829849981116321799778888637989974991737999999998828
Q gi|254781172|r  643 VSSEIENKKLVFTGTLQKIQRHKAQEYVTQLGAVVSAILSRKTDIIIVGDNPGSKLEKAQQLGVKIMNEEQFLFLLQQYN  722 (731)
Q Consensus       643 ~~~~l~gk~vV~TGtl~~~~R~e~~~~ie~~Ggkv~sSVSkkT~~LI~ge~~gSKl~KA~~LgI~Ii~e~ef~~ll~~~~  722 (731)
                      -+..|.|++||+|| |..-.|+++.++|+.+||++..+++.+|++||++...|.|+..|.++|++|++.+.+.+.+....
T Consensus       104 ~~~~l~g~~i~~sg-~~~~e~~~i~~~i~~~GG~v~~~~~~~~ThlI~~~~~~~Ky~~A~~~~~~iv~~~Wl~~~~~~~~  182 (292)
T 2xnk_A          104 YNMVMSDVTISCTS-LEKEKREEVHKYVQMMGGRVYRDLNVSVTHLIAGEVGSKKYLVAANLKKPILLPSWIKTLWEKSQ  182 (292)
T ss_dssp             CCCTTTTCEEEEES-CCHHHHHHHHHHHHHTTCEECSSCCTTCCEEEESSSCSHHHHHHHHTTCCEECTHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEECC-CCHHHHHHHHHHHHHCCCEEECCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHCC
T ss_conf             63036996899848-99899999999999879999477688703999956898276766650787547299999998086


Q ss_pred             C
Q ss_conf             6
Q gi|254781172|r  723 T  723 (731)
Q Consensus       723 ~  723 (731)
                      .
T Consensus       183 ~  183 (292)
T 2xnk_A          183 E  183 (292)
T ss_dssp             T
T ss_pred             C
T ss_conf             4