BLAST/PSIBLAST alignment of GI: 254781172 and GI: 116253034 at iteration 1
>gi|116253034|ref|YP_768872.1| NAD-dependent DNA ligase LigA [Rhizobium leguminosarum bv. viciae 3841] Length = 718
>gi|123261370|sp|Q1ME47|DNLJ_RHIL3 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide synthase [NAD+] Length = 718
>gi|115257682|emb|CAK08780.1| putative DNA ligase [Rhizobium leguminosarum bv. viciae 3841] Length = 718
Score = 698 bits (1802), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/712 (48%), Positives = 494/712 (69%), Gaps = 5/712 (0%)
Query: 9 IEALSIEQARKELSSLEQEISYHDDCYYQYSKPIILDSEYDALKRRCDAIAHAFPDLARS 68
++ L+IE+A EL+ L +EI++HD Y+ +P I D++YDALKRR DA+ FP+L R
Sbjct: 8 VDTLTIEEAAAELARLAKEIAHHDALYHGKDQPEISDADYDALKRRNDALEVRFPELIRE 67
Query: 69 EDPNGPLNKIGGEMNLSLFKVTHSIPTLSLEKIWNIEDLRKFITRIYRFWQKKDDNSIFF 128
+ P+ +G +++ V H+ P LSL+ ++ ED++ F+ +YRF + D SI F
Sbjct: 68 DSPS---RHVGAAPSVTFSPVVHARPMLSLDNTFSQEDVQDFVAGVYRFLGRLPDQSIAF 124
Query: 129 TLEPKIDGTMITIRYEKGKFVYAALRGDGHSGEDVSACIRAIPTIPRVLSLNIPEIIEVR 188
T EPKIDG ++IRYE G+ V AA RGDG +GE+V+A IR I IP L +P ++E+R
Sbjct: 125 TAEPKIDGLSMSIRYENGRLVTAATRGDGTTGENVTANIRTIAEIPNELPKGVPAVVEIR 184
Query: 189 GEVYISKNDFLALNDEMIAVGRKPYANPRNAASGILRRLNP-TDITRYLNFFVHGLGKTS 247
GEVY++K+DFLALN +M A G++ Y NPRN A+G LR+L+ +R L FF + G+ S
Sbjct: 185 GEVYMAKSDFLALNRQMEAEGKQTYVNPRNTAAGSLRQLDAKVTASRKLKFFAYAWGEMS 244
Query: 248 EIFAKGQYEMLQKMRCLGFPVNNGVRQANTFHGIVSYYNEMKSIRSTLPYDIDGLVYKVD 307
E+ A Q+ M+Q + GFPVN +++ N+ I+++Y+E+ R L YDIDG+VYKVD
Sbjct: 245 EMPADTQFGMVQTFKDWGFPVNPLMKRLNSVADILAHYDEIGLERPDLDYDIDGVVYKVD 304
Query: 308 EFSLQKQLGERARSPRWMISHKFAEKQASTRLLDIDIQIGRTGILTPVARLEPVNIGGAL 367
LQ +LG R+RSPRW +HKF +QA T + +IDIQ+GRTG LTPVARL P+ +GG +
Sbjct: 305 SLELQARLGFRSRSPRWATAHKFPAEQAFTIVENIDIQVGRTGALTPVARLTPITVGGVV 364
Query: 368 ITNATLHNEDYIKGLDASGKVMRGGR-DIRVGDRVLVKRAGEVIPKVVDIIVNERHPDAQ 426
+TNATLHN DYI+G+ SG+ +R DIR+GD V+V+RAG+VIP+V+D+++ +R +A+
Sbjct: 365 VTNATLHNADYIQGIGNSGERIRDDEHDIRIGDTVIVQRAGDVIPQVLDVVMEKRPAEAR 424
Query: 427 PFSFPSFCPICQSRVVRDLNPKTGKLVAAHRCTGGLACSAQQLERLKHFVSRDAFNIEGL 486
P+ FP CP+C S VR+ + KTGKL + RCTGG C AQ E LKHFVSR+AF+IEGL
Sbjct: 425 PYEFPKTCPVCGSHAVRERHEKTGKLDSVTRCTGGFICRAQATEHLKHFVSRNAFDIEGL 484
Query: 487 GKQQLDFFFKSEDPAFSIRIPADIFTLQRRQQTSTTKIENILGFGDVSVTNLYDSINKRR 546
G +Q+DFFF++ED + IR DIFTL++RQQ S TK+ENI GFG VSV LY +I++RR
Sbjct: 485 GSKQIDFFFENEDASLQIRTAPDIFTLEKRQQQSLTKLENIDGFGKVSVGKLYGAIDERR 544
Query: 547 NISLERFIFSLGIRHVGAEIARSLAKYYLSYQNFAQEINNIIAHNNDDWLSLIRVPLVGD 606
+I+L RFI++LGIRHVG A+ LA+ Y +Y+ F + A + D W L + +G+
Sbjct: 545 SIALHRFIYALGIRHVGETTAKLLARSYGTYEAFETAMREAEALSGDAWNDLNAIEGIGE 604
Query: 607 IIAQAIVEFYQNPRNICAVEALLKEVSPSIGRHEKNVSSEIENKKLVFTGTLQKIQRHKA 666
++A+AIVEFY+ PRN+ + LL+EV+P K S + K +VFTG+L+K+ R +A
Sbjct: 605 VVARAIVEFYKEPRNVEVITRLLEEVTPEEAEQPKTAGSPVAGKTVVFTGSLEKLTRDEA 664
Query: 667 QEYVTQLGAVVSAILSRKTDIIIVGDNPGSKLEKAQQLGVKIMNEEQFLFLL 718
+ LGA V+ +S+KTDI++ G GSKL+KA++LGV+ M+E+Q+L L+
Sbjct: 665 KARAESLGAKVAGSVSKKTDIVVAGPGAGSKLDKARELGVQTMDEDQWLALI 716