PSIBLAST alignment of GI: 254781172 and protein with PDB id: 3jsl
>gi|281307118|pdb|3JSL|A Chain A, Crystal Structure Of The Adenylation Domain Of Nad+- Dependent Dna Ligase From Staphylococcus Aureus Length = 318
>gi|281307119|pdb|3JSL|B Chain B, Crystal Structure Of The Adenylation Domain Of Nad+- Dependent Dna Ligase From Staphylococcus Aureus Length = 318
Score = 257 bits (655), Expect = 7e-66, Method: Composition-based stats.
Identities = 108/322 (33%), Positives = 168/322 (52%), Gaps = 11/322 (3%)
Query: 14 IEQARKELSSLEQEISYHDDCYYQYSKPIILDSEYDALKRRCDAIAHAFPDLARSEDPNG 73
+ ++ L ++ + YY P + DSEYD L I P+ +
Sbjct: 1 MADLSSRVNELHDLLNQYSYEYYVEDNPSVPDSEYDKLLHELIKIEEEHPEYKTV---DS 57
Query: 74 PLNKIGGEMNLSLFKVTHSIPTLSLEKIWNIEDLRKFITRIYRFWQKKDDNSIFFTLEPK 133
P ++GGE S KV H P LSL +N +DLRKF RI ++ + E K
Sbjct: 58 PTVRVGGEAQASFNKVNHDTPMLSLGNAFNEDDLRKFDQRIREQIG-----NVEYMCELK 112
Query: 134 IDGTMITIRYEKGKFVYAALRGDGHSGEDVSACIRAIPTIPRVLSLNIPEIIEVRGEVYI 193
IDG ++++Y G FV RGDG +GED++ ++ I IP + + +EVRGE Y+
Sbjct: 113 IDGLAVSLKYVDGYFVQGLTRGDGTTGEDITENLKTIHAIPLKMKEPLN--VEVRGEAYM 170
Query: 194 SKNDFLALNDEMIAVGRKPYANPRNAASGILRRLNPT-DITRYLNFFVHGLGKTSEIFAK 252
+ FL LN+E + +ANPRNAA+G LR+L+ R L+ F++ + ++ A+
Sbjct: 171 PRRSFLRLNEEKEKNDEQLFANPRNAAAGSLRQLDSKLTAKRKLSVFIYSVNDFTDFNAR 230
Query: 253 GQYEMLQKMRCLGFPVNNGVRQANTFHGIVSYYNEMKSIRSTLPYDIDGLVYKVDEFSLQ 312
Q E L ++ LGF N + N G++ Y + S R +LPYDIDG+V KV++ Q
Sbjct: 231 SQSEALDELDKLGFTTNKNRARVNNIDGVLEYIEKWTSQRESLPYDIDGIVIKVNDLDQQ 290
Query: 313 KQLGERARSPRWMISHKFAEKQ 334
++G +SPRW I++KF ++
Sbjct: 291 DEMGFTQKSPRWAIAYKFPAEE 312