RPSBLAST alignment for GI: 254781172 and conserved domain: COG0272

>gnl|CDD|30621 COG0272, Lig, NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair]. Length = 667
 Score =  682 bits (1762), Expect = 0.0
 Identities = 284/711 (39%), Positives = 434/711 (61%), Gaps = 48/711 (6%)

Query: 11  ALSIEQARKELSSLEQEISYHDDCYYQYSKPIILDSEYDALKRRCDAIAHAFPDLARSED 70
           A S+ +A++E+  L + ++ HD  YY    P + D+EYD L R    +    P+L     
Sbjct: 1   AWSMAEAQEEIEELRELLNKHDYRYYVLDAPSVSDAEYDQLYRELQELEEKHPELIT--- 57

Query: 71  PNGPLNKIGGEMNLSLFKVTHSIPTLSLEKIWNIEDLRKFITRIYRFWQKKDDNSIFFTL 130
           P+ P  ++G     +  KV H +P LSL+  ++ E+LR F  RI +F      +S+ + +
Sbjct: 58  PDSPTQRVGAAPLNAFKKVRHPVPMLSLDNAFDEEELRAFDRRIRKFL----GDSVEYVV 113

Query: 131 EPKIDGTMITIRYEKGKFVYAALRGDGHSGEDVSACIRAIPTIPRVLSLNIPEIIEVRGE 190
           EPKIDG  I++ YE GK V AA RGDG +GED++A +R I +IP  L    P ++EVRGE
Sbjct: 114 EPKIDGLAISLVYENGKLVRAATRGDGTTGEDITANVRTIRSIPLKLP-GAPAVLEVRGE 172

Query: 191 VYISKNDFLALNDEMIAVGRKPYANPRNAASGILRRLNPTDIT-RYLNFFVHGLGKTSEI 249
           V++ K DF ALN+E    G KP+ANPRNAA+G LR+L+P     R L FF++ +G   E 
Sbjct: 173 VFMPKEDFEALNEEREEEGEKPFANPRNAAAGSLRQLDPKITAKRKLGFFIYAVGDGEEG 232

Query: 250 -FAKGQYEMLQKMRCLGFPVNNGVRQANTFHGIVSYYNEMKSIRSTLPYDIDGLVYKVDE 308
             A  Q E L  ++  GFPVN   R       ++++Y E +  R++LPYDIDG+V KV++
Sbjct: 233 LLADTQSERLAFLKAWGFPVNPYTRLCKNADEVLAFYEEWEKKRASLPYDIDGVVIKVND 292

Query: 309 FSLQKQLGERARSPRWMISHKFAEKQASTRLLDIDIQIGRTGILTPVARLEPVNIGGALI 368
            +LQ++LG  +++PRW I++KF  ++A T+LLDI++Q+GRTG +TPVARLEPV + G  +
Sbjct: 293 LALQRELGFTSKAPRWAIAYKFPAEEAVTKLLDIEVQVGRTGAITPVARLEPVELAGVTV 352

Query: 369 TNATLHNEDYIKGLDASGKVMRGGRDIRVGDRVLVKRAGEVIPKVVDIIVNERHPDAQPF 428
           + ATLHN D IK             DIR+GD V+V++AG+VIP+VV +++ +R  + +P 
Sbjct: 353 SRATLHNVDEIKRK-----------DIRIGDTVVVRKAGDVIPQVVGVVLEKRPGNEKPI 401

Query: 429 SFPSFCPICQSRVVRDLNPKTGKLVAAHRCTGGLACSAQQLERLKHFVSRDAFNIEGLGK 488
            FP+ CP+C S +VR       +     RCT GL C AQ  ERL HFVSR+A +I+GLG+
Sbjct: 402 PFPTHCPVCGSELVR------EEGEVVIRCTNGLNCPAQLKERLIHFVSRNALDIDGLGE 455

Query: 489 QQLDFFFKSEDPAFSIRIPADIFTLQRRQQTSTTKIENILGFGDVSVTNLYDSINKRRNI 548
           + ++  F+       I+  AD++TL          + ++ GFG+ S  NL ++I K +  
Sbjct: 456 KIIEQLFEKG----LIKDIADLYTLTEED------LLSLEGFGEKSAENLLNAIEKSKKQ 505

Query: 549 SLERFIFSLGIRHVGAEIARSLAKYYLSYQNFAQEINNIIAHNNDDWLSLIRVPLVGDII 608
            L RF+++LGIRHVG   A+SLA+++ + +        ++A + ++  S   +P +G+++
Sbjct: 506 PLARFLYALGIRHVGETTAKSLARHFGTLE-------ALLAASEEELAS---IPGIGEVV 555

Query: 609 AQAIVEFYQNPRNICAVEALLKE-VSPSIGRHEKNVSSEIENKKLVFTGTLQKIQRHKAQ 667
           A++I+EF+ N  N   ++ LL   V           +S +  K  V TGTL+ + R +A+
Sbjct: 556 ARSIIEFFANEENRELIDELLAAGVKWEEEEKISIETSPLAGKTFVLTGTLEGMSRDEAK 615

Query: 668 EYVTQLGAVVSAILSRKTDIIIVGDNPGSKLEKAQQLGVKIMNEEQFLFLL 718
             +  LGA VS  +S+KTD ++ G+N GSKL KAQ+LGVKI++EE+FL LL
Sbjct: 616 ALLEALGAKVSGSVSKKTDYVVAGENAGSKLAKAQELGVKIIDEEEFLALL 666