RPSBLAST alignment of GI: 254781172 and protein with PDBid: 1b04

 Score =  217 bits (553), Expect = 6e-57
 Identities = 113/327 (34%), Positives = 177/327 (54%), Gaps = 11/327 (3%)

Query: 12  LSIEQARKELSSLEQEISYHDDCYYQYSKPIILDSEYDALKRRCDAIAHAFPDLARSEDP 71
           +  +QA +  + L + ++ +   YY   +P + D+EYD L +   AI   +P+L      
Sbjct: 1   MDRQQAERRAAELRELLNRYGYEYYVLDRPSVPDAEYDRLMQELIAIEEQYPELK---TS 57

Query: 72  NGPLNKIGGEMNLSLFKVTHSIPTLSLEKIWNIEDLRKFITRIYRFWQKKDDNSIFFTLE 131
           + P  +IGG    +  KV H +P +SL   +   D      R +    +++     +  E
Sbjct: 58  DSPTQRIGGPPLEAFRKVAHRVPMMSLANAFGEGD-----LRDFDRRVRQEVGEAAYVCE 112

Query: 132 PKIDGTMITIRYEKGKFVYAALRGDGHSGEDVSACIRAIPTIPRVLSLNIPEIIEVRGEV 191
             IDG  +++RYE G FV  A RGDG +GED++  ++ I ++P  L L  P  +E RGE 
Sbjct: 113 LAIDGLAVSVRYEDGYFVQGATRGDGTTGEDITENLKTIRSLP--LRLKEPVSLEARGEA 170

Query: 192 YISKNDFLALNDEMIAVGRKPYANPRNAASGILRRLNPTDIT-RYLNFFVHGLGKTSEIF 250
           ++ K  FL LN+E  A G + +ANPRNAA+G LR+L+P     R L+ FV+GL     + 
Sbjct: 171 FMPKASFLRLNEERKARGEELFANPRNAAAGSLRQLDPKVAASRQLDLFVYGLADAEALG 230

Query: 251 AKGQYEMLQKMRCLGFPVNNGVRQANTFHGIVSYYNEMKSIRSTLPYDIDGLVYKVDEFS 310
                E L  ++ LGF VN   R+      ++++ +E    R  LPY+IDG+V KVD F+
Sbjct: 231 IASHSEALDYLQALGFKVNPERRRCANIDEVIAFVSEWHDKRPQLPYEIDGIVIKVDSFA 290

Query: 311 LQKQLGERARSPRWMISHKFAEKQAST 337
            Q+ LG  A+SPRW I++KF  ++  T
Sbjct: 291 QQRALGATAKSPRWAIAYKFPAEEVVT 317