RPSBLAST alignment of GI: 254781172 and protein with PDBid: 1zau

>1zau_A DNA ligase; AMP; HET: DNA AMP; 3.15A {Mycobacterium tuberculosis} Length = 328
 Score =  216 bits (550), Expect = 1e-56
 Identities = 106/332 (31%), Positives = 171/332 (51%), Gaps = 14/332 (4%)

Query: 8   PIEALSIEQARKELSSLEQEISYHDDCYYQYSKPIILDSEYDALKRRCDAIAHAFPDLAR 67
           P    +  +  ++  +L +E+  H   YY    PII D+E+D L RR +A+    P+L  
Sbjct: 4   PDADQTAPEVLRQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPELR- 62

Query: 68  SEDPNGPLNKIGGEMNLSLF-KVTHSIPTLSLEKIWNIEDLRKFITRIYRFWQKKDDNSI 126
              P+ P   +GG    + F  V H    LSL+  +  ++L  +          +  ++ 
Sbjct: 63  --TPDSPTQLVGGAGFATDFEPVDHLERMLSLDNAFTADELAAW----AGRIHAEVGDAA 116

Query: 127 FFTLEPKIDGTMITIRYEKGKFVYAALRGDGHSGEDVSACIRAIPTIPRVLS----LNIP 182
            +  E KIDG  +++ Y +G+   A+ RGDG +GEDV+   R I  +P  L+      +P
Sbjct: 117 HYLCELKIDGVALSLVYREGRLTRASTRGDGRTGEDVTLNARTIADVPERLTPGDDYPVP 176

Query: 183 EIIEVRGEVYISKNDFLALNDEMIAVGRKPYANPRNAASGILRRLNPTDIT-RYLNFFVH 241
           E++EVRGEV+   +DF ALN  ++  G+ P+ANPRN+A+G LR+ +P     R L    H
Sbjct: 177 EVLEVRGEVFFRLDDFQALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICH 236

Query: 242 GLGKTSEIFAKGQYEMLQKMRCLGFPVNNGVRQANTFHGIVSYYNEMKSIRSTLPYDIDG 301
           GLG          ++    +R  G PV+     A    G+    +     R  + ++IDG
Sbjct: 237 GLGHVEGFRPATLHQAYLALRAWGLPVSEHTTLATDLAGVRERIDYWGEHRHEVDHEIDG 296

Query: 302 LVYKVDEFSLQKQLGERARSPRWMISHKF-AE 332
           +V KVDE +LQ++LG  +R+PRW I++K+  E
Sbjct: 297 VVVKVDEVALQRRLGSTSRAPRWAIAYKYPPE 328