RPSBLAST alignment of GI: 254781172 and protein with PDBid: 2owo
>2owo_A DNA ligase; protein/DNA complex, ligase/DNA complex; HET: DNA OMC AMP; 2.30A {Escherichia coli K12} Length = 671
Score = 428 bits (1102), Expect = e-120
Identities = 235/711 (33%), Positives = 386/711 (54%), Gaps = 48/711 (6%)
Query: 14 IEQARKELSSLEQEISYHDDCYYQYSKPIILDSEYDALKRRCDAIAHAFPDLARSEDPNG 73
+E ++L+ L + +H+ Y+ P I D+EYD L R + P+L P+
Sbjct: 1 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELI---TPDS 57
Query: 74 PLNKIGGEMNLSLFKVTHSIPTLSLEKIWNIEDLRKFITRIYRFWQKKDDNSIFFTLEPK 133
P ++G + ++ H +P LSL+ +++ E F R+ K++ + + E K
Sbjct: 58 PTQRVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRL--KNNEKVTWCCELK 115
Query: 134 IDGTMITIRYEKGKFVYAALRGDGHSGEDVSACIRAIPTIP-RVLSLNIPEIIEVRGEVY 192
+DG ++I YE G V AA RGDG +GED+++ +R I IP ++ NIP +EVRGEV+
Sbjct: 116 LDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVF 175
Query: 193 ISKNDFLALNDEMIAVGRKPYANPRNAASGILRRLNPTDITR--YLNFFVHGLGKTSEIF 250
+ + F +N++ G K +ANPRNAA+G LR+L+P + F
Sbjct: 176 LPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGEL 235
Query: 251 AKGQYEMLQKMRCLGFPVNNGVRQANTFHGIVSYYNEMKSIRSTLPYDIDGLVYKVDEFS 310
L + + G PV++ V + ++++Y++++ R TL +DIDG+V KV+ +
Sbjct: 236 PDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLA 295
Query: 311 LQKQLGERARSPRWMISHKFAEKQASTRLLDIDIQIGRTGILTPVARLEPVNIGGALITN 370
Q+QLG AR+PRW ++ KF ++ T + D++ Q+GRTG +TPVARLEPV++ G L++N
Sbjct: 296 QQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSN 355
Query: 371 ATLHNEDYIKGLDASGKVMRGGRDIRVGDRVLVKRAGEVIPKVVDIIVNERHPDAQPFSF 430
ATLHN D I+ L +R+GD+V+++RAG+VIP+VV+++++ER D + F
Sbjct: 356 ATLHNADEIERLG-----------LRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVF 404
Query: 431 PSFCPICQSRVVRDLNPKTGKLVAAHRCTGGLACSAQQLERLKHFVSRDAFNIEGLGKQQ 490
P+ CP+C S V R RCTGGL C AQ+ E LKHFVSR A +++G+G +
Sbjct: 405 PTHCPVCGSDVERVEGEA------VARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKI 458
Query: 491 LDFFFKSEDPAFSIRIPADIFTLQRRQQTSTTKIENILGFGDVSVTNLYDSINKRRNISL 550
+D + E T + + K+ + G S N+ +++ K + +
Sbjct: 459 IDQLVEKEYV----------HTPADLFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTF 508
Query: 551 ERFIFSLGIRHVGAEIARSLAKYYLSYQNFAQEINNIIAHNNDDWLSLIRVPLVGDIIAQ 610
RF+++LGIR VG A LA Y+ + + L +VP VG ++A
Sbjct: 509 ARFLYALGIREVGEATAAGLAAYFGTLEALE----------AASIEELQKVPDVGIVVAS 558
Query: 611 AIVEFYQNPRNICAVEALLKE---VSPSIGRHEKNVSSEIENKKLVFTGTLQKIQRHKAQ 667
+ F+ N + LL E I + + + S K +V TG+L ++ R A+
Sbjct: 559 HVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAK 618
Query: 668 EYVTQLGAVVSAILSRKTDIIIVGDNPGSKLEKAQQLGVKIMNEEQFLFLL 718
+ +LGA V+ +S+KTD++I G+ GSKL KAQ+LG+++++E + L LL
Sbjct: 619 ARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLL 669