RPSBLAST alignment of GI: 254781172 and protein with PDBid: 3jsl

>3jsl_A DNA ligase; NAD+-dependent, DNA damage, DNA repair, DNA replication, magnesium, manganese, metal-binding, NAD, zinc; HET: DNA; 1.80A {Staphylococcus aureus} PDB: 3jsn_A* Length = 318

 Score =  263 bits (672), Expect = 1e-70
 Identities = 112/322 (34%), Positives = 170/322 (52%), Gaps = 12/322 (3%)

Query: 14  IEQARKELSSLEQEISYHDDCYYQYSKPIILDSEYDALKRRCDAIAHAFPDLARSEDPNG 73
           +      ++ L   ++ +   YY    P + DSEYD L      I    P+       + 
Sbjct: 1   MADLSSRVNELHDLLNQYSYEYYVEDNPSVPDSEYDKLLHELIKIEEEHPEYK---TVDS 57

Query: 74  PLNKIGGEMNLSLFKVTHSIPTLSLEKIWNIEDLRKFITRIYRFWQKKDDNSIFFTLEPK 133
           P  ++GGE   S  KV H  P LSL   +N +DLRKF  RI          ++ +  E K
Sbjct: 58  PTVRVGGEAQASFNKVNHDTPMLSLGNAFNEDDLRKFDQRIREQI-----GNVEYMCELK 112

Query: 134 IDGTMITIRYEKGKFVYAALRGDGHSGEDVSACIRAIPTIPRVLSLNIPEIIEVRGEVYI 193
           IDG  ++++Y  G FV    RGDG +GED++  ++ I  IP  L +  P  +EVRGE Y+
Sbjct: 113 IDGLAVSLKYVDGYFVQGLTRGDGTTGEDITENLKTIHAIP--LKMKEPLNVEVRGEAYM 170

Query: 194 SKNDFLALNDEMIAVGRKPYANPRNAASGILRRLNPTDI-TRYLNFFVHGLGKTSEIFAK 252
            +  FL LN+E      + +ANPRNAA+G LR+L+      R L+ F++ +   ++  A+
Sbjct: 171 PRRSFLRLNEEKEKNDEQLFANPRNAAAGSLRQLDSKLTAKRKLSVFIYSVNDFTDFNAR 230

Query: 253 GQYEMLQKMRCLGFPVNNGVRQANTFHGIVSYYNEMKSIRSTLPYDIDGLVYKVDEFSLQ 312
            Q E L ++  LGF  N    + N   G++ Y  +  S R +LPYDIDG+V KV++   Q
Sbjct: 231 SQSEALDELDKLGFTTNKNRARVNNIDGVLEYIEKWTSQRESLPYDIDGIVIKVNDLDQQ 290

Query: 313 KQLGERARSPRWMISHKF-AEK 333
            ++G   +SPRW I++KF AE+
Sbjct: 291 DEMGFTQKSPRWAIAYKFPAEE 312