HHsearch alignment for GI: 254781174 and conserved domain: CHL00033

Probab=98.45  E-value=4e-06  Score=53.81  Aligned_cols=130  Identities=15%  Similarity=0.130  Sum_probs=100.1

Q ss_pred             HHHHCCCCCCHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             9853047730268--99877887765455567999998875401121101355544344455554431112345899999
Q gi|254781174|r   83 CSRDFPFAGVARK--SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ  160 (271)
Q Consensus        83 i~~~~P~s~~a~~--A~~~la~~~y~~~~y~~A~~~~~~fi~~~P~s~~~~~A~y~~a~~~~~~~~~~~~d~~~~~~A~~  160 (271)
T Consensus        18 ~~k~~p~~~~~k~af~yyr~GmsaQs~GeyaEALe~Y~eAL~Le~D~~Drs~iLYNIGlIy~~n--------Ge~~kALe   89 (165)
T CHL00033         18 LLKILPTTSGEKEAFTYYRDGMSAQSEGEYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSN--------GEHTKALE   89 (165)
T ss_pred             HHHHCCCCCCHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHC--------CCHHHHHH
T ss_conf             9998088842288999998151010135389999999986234568512668998999999985--------88889999


Q ss_pred             HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             999999852001013456555555566666665556666654432234568999886528998
Q gi|254781174|r  161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA  223 (271)
Q Consensus       161 ~f~~~i~~yP~S~ya~~A~~~l~~~~~~La~~e~~ia~~Y~~~~~y~aA~~~~~~~i~~yp~t  223 (271)
T Consensus        90 yY~qALeiNP~~---pqA~NNlGvIyh~qG~~a~~~~~~~~~~~~fd~aa~~w~~ai~lap~n  149 (165)
T CHL00033         90 YYFQALERNPFL---PQALNNMAVICHYRGEQAIEQGDSEIAEAWFDQAAEYWKQAIALAPGN  149 (165)
T ss_pred             HHHHHHHHCCCC---HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf             999999859996---899978999999987999984586789999999999999987038997