HHsearch alignment for GI: 254781174 and conserved domain: COG2956
>COG2956 Predicted N-acetylglucosaminyl transferase [Carbohydrate transport and metabolism].
Probab=99.43 E-value=8.1e-11 Score=81.17 Aligned_cols=198 Identities=20% Similarity=0.246 Sum_probs=114.8
Q ss_pred HHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH--HHHHHHHHH
Q ss_conf 999999998098999999999998530477302689987788776545556799999887540112110--135554434
Q gi|254781174|r 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN--VDYVYYLVG 138 (271)
Q Consensus 61 Y~~a~~~~~~~~y~~A~~~f~~i~~~~P~s~~a~~A~~~la~~~y~~~~y~~A~~~~~~fi~~~P~s~~--~~~A~y~~a 138 (271)
T Consensus 39 Yv~GlNfLLs~Q~dKAvdlF~e~l~~d~~---t~e~~ltLGnLfRsRGEvDRAIRiHQ~L~~s-pdlT~~qr~lAl~qL~ 114 (389)
T COG2956 39 YVKGLNFLLSNQPDKAVDLFLEMLQEDPE---TFEAHLTLGNLFRSRGEVDRAIRIHQTLLES-PDLTFEQRLLALQQLG 114 (389)
T ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHCCCH---HHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC-CCCCHHHHHHHHHHHH
T ss_conf 88678898616963699999999835815---6789889888988635088999999988528-9986689999999998
Q ss_pred HHHHH------------HHHH--------------HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH---
Q ss_conf 44555------------5443--------------111234589999999999985200101345655555556666---
Q gi|254781174|r 139 MSYAQ------------MIRD--------------VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL--- 189 (271)
Q Consensus 139 ~~~~~------------~~~~--------------~~~d~~~~~~A~~~f~~~i~~yP~S~ya~~A~~~l~~~~~~L--- 189 (271)
T Consensus 115 ~Dym~aGl~DRAE~~f~~L~de~efa~~AlqqLl~IYQ~treW~KAIe~A~~L~k~~~q~~~~eIAqfyCELAq~~~~~~ 194 (389)
T COG2956 115 RDYMAAGLLDRAEDIFNQLVDEGEFAEGALQQLLNIYQATREWEKAIDVAERLVKLGGQTYRVEIAQFYCELAQQALASS 194 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 99998564668999999973463432899999999999836899999999999971885212589999999999974031
Q ss_pred -------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH
Q ss_conf -------------------6665556666654432234568999886528998115999999999999749879999999
Q gi|254781174|r 190 -------------------AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250 (271)
Q Consensus 190 -------------------a~~e~~ia~~Y~~~~~y~aA~~~~~~~i~~yp~t~~~~eAl~~l~~~y~~lg~~d~A~~~~ 250 (271)
T Consensus 195 ~~d~A~~~l~kAlqa~~~cvRAsi~lG~v~~~~g~y~~AV~~~e~v~~Q--n~~yl~evl~~L~~~Y~~lg~~~~~~~fL 272 (389)
T COG2956 195 DVDRARELLKKALQADKKCVRASIILGRVELAKGDYQKAVEALERVLEQ--NPEYLSEVLEMLYECYAQLGKPAEGLNFL 272 (389)
T ss_pred HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH--CHHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_conf 1899999999998628200103545438887526669999999999984--95779999999999999947877899999
Q ss_pred HHHHHHCCCCHHHH
Q ss_conf 99978569997899
Q gi|254781174|r 251 SLIQERYPQGYWAR 264 (271)
Q Consensus 251 ~~l~~~yP~s~~~~ 264 (271)
T Consensus 273 ~~~~~~~~g~~~~l 286 (389)
T COG2956 273 RRAMETNTGADAEL 286 (389)
T ss_pred HHHHHCCCCCCHHH
T ss_conf 99986447851999