HHsearch alignment for GI: 254781174 and conserved domain: COG2976
>COG2976 Uncharacterized protein conserved in bacteria [Function unknown].
Probab=98.22 E-value=0.00012 Score=45.24 Aligned_cols=181 Identities=15% Similarity=0.135 Sum_probs=111.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC
Q ss_conf 99999999999999999999999997226875333445677767368999999999998098999999999998530477
Q gi|254781174|r 11 IFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90 (271)
Q Consensus 11 ~~~~~~~~m~k~~~~i~~~i~~~~l~~Cs~~~~~~~~~~~~~~~~~~~~lY~~a~~~~~~~~y~~A~~~f~~i~~~~P~s 90 (271)
T Consensus 13 ~ik~wwkeNGk~-li~gviLg~~~lfGW~ywq~~q~-----~q~~~AS~~Y~~~i~~~~ak~~-~~~~~~ekf~~~n~~t 85 (207)
T COG2976 13 AIKDWWKENGKA-LIVGVILGLGGLFGWRYWQSHQV-----EQAQEASAQYQNAIKAVQAKKP-KSIAAAEKFVQANGKT 85 (207)
T ss_pred HHHHHHHHCCCH-HHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHCCCC-HHHHHHHHHHHHCCCC
T ss_conf 999999977907-89999999999998899999878-----8888999999999999855770-2599999998615635
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 30268998778877654555679999988754011211013555443444555544311123458999999999998520
Q gi|254781174|r 91 GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 (271)
Q Consensus 91 ~~a~~A~~~la~~~y~~~~y~~A~~~~~~fi~~~P~s~~~~~A~y~~a~~~~~~~~~~~~d~~~~~~A~~~f~~~i~~yP 170 (271)
T Consensus 86 ~Ya~laaL~lAk~~ve~~~~d~A~aqL~~~l~~t~De~lk~l~~lRLAr--------vq~q~~k~D~AL~~L~t~~~--- 154 (207)
T COG2976 86 IYAVLAALELAKAEVEANNLDKAEAQLKQALAQTKDENLKALAALRLAR--------VQLQQKKADAALKTLDTIKE--- 154 (207)
T ss_pred HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHCCCC---
T ss_conf 8999999999999986342999999999987145257899999999999--------99986038889998723011---
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
Q ss_conf 010134565555555666666655566666544322345689998865289981
Q gi|254781174|r 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224 (271)
Q Consensus 171 ~S~ya~~A~~~l~~~~~~La~~e~~ia~~Y~~~~~y~aA~~~~~~~i~~yp~t~ 224 (271)
T Consensus 155 -~~w~~--------------~~~elrGDill~kg~k~~Ar~ay~kAl~~~~s~~ 193 (207)
T COG2976 155 -ESWAA--------------IVAELRGDILLAKGDKQEARAAYEKALESDASPA 193 (207)
T ss_pred -CCHHH--------------HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHH
T ss_conf -10788--------------9999742699972865999999999987157748