HHsearch alignment for GI: 254781174 and conserved domain: COG4700
>COG4700 Uncharacterized protein conserved in bacteria containing a divergent form of TPR repeats [Function unknown].
Probab=97.32 E-value=0.0089 Score=34.27 Aligned_cols=122 Identities=16% Similarity=0.182 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
Q ss_conf 98778877654555679999988754011211013555443444555544311123458999999999998520010134
Q gi|254781174|r 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176 (271)
Q Consensus 97 ~~~la~~~y~~~~y~~A~~~~~~fi~~~P~s~~~~~A~y~~a~~~~~~~~~~~~d~~~~~~A~~~f~~~i~~yP~S~ya~ 176 (271)
T Consensus 92 r~rLa~al~elGr~~EA~~hy~qals----G~fA~d~a~lLglA~Aqf------a~~~~A~a~~tLe~l~e~~pa~-r~- 159 (251)
T COG4700 92 RYRLANALAELGRYHEAVPHYQQALS----GIFAHDAAMLLGLAQAQF------AIQEFAAAQQTLEDLMEYNPAF-RS- 159 (251)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHC----CCCCCCHHHHHHHHHHHH------HHCCHHHHHHHHHHHHHCCCCC-CC-
T ss_conf 99999999984105666889999854----656798899988898888------6165888888999986059765-89-
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHH
Q ss_conf 56555555566666665556666654432234568999886528998115999999999999749879999
Q gi|254781174|r 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247 (271)
Q Consensus 177 ~A~~~l~~~~~~La~~e~~ia~~Y~~~~~y~aA~~~~~~~i~~yp~t~~~~eAl~~l~~~y~~lg~~d~A~ 247 (271)
T Consensus 160 -------------pd~~Ll~aR~laa~g~~a~Aesafe~a~~~ypg~----~ar~~Y~e~La~qgr~~ea~ 213 (251)
T COG4700 160 -------------PDGHLLFARTLAAQGKYADAESAFEVAISYYPGP----QARIYYAEMLAKQGRLREAN 213 (251)
T ss_pred -------------CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCH----HHHHHHHHHHHHHCCHHHHH
T ss_conf -------------9725899999984588055899999999858877----78989999999712216788