HHsearch alignment for GI: 254781174 and conserved domain: KOG1129

Probab=97.75  E-value=0.0025  Score=37.48  Aligned_cols=187  Identities=17%  Similarity=0.182  Sum_probs=117.9

Q ss_pred             CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
Q ss_conf             73689999999999980989999999999985304773026899877887765455567999998875401121101355
Q gi|254781174|r   54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV  133 (271)
Q Consensus        54 ~~~~~~lY~~a~~~~~~~~y~~A~~~f~~i~~~~P~s~~a~~A~~~la~~~y~~~~y~~A~~~~~~fi~~~P~s~~~~~A  133 (271)
T Consensus       253 ~~~~dTfllLskvY~ridQP~~AL~~~~~gld~fP~~V---T~l~g~ARi~eam~~~~~a~~lYk~vlk~~~~nvEa---  326 (478)
T KOG1129         253 FPHPDTFLLLSKVYQRIDQPERALLVIGEGLDSFPFDV---TYLLGQARIHEAMEQQEDALQLYKLVLKLHPINVEA---  326 (478)
T ss_pred             CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE---
T ss_conf             77616999999999872358899999864652388325---666636999999970788999999998408765003---


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH--------------HHHH--HHHH----
Q ss_conf             5443444555544311123458999999999998520010134565555555--------------6666--6665----
Q gi|254781174|r  134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG--------------RNQL--AAKE----  193 (271)
Q Consensus       134 ~y~~a~~~~~~~~~~~~d~~~~~~A~~~f~~~i~~yP~S~ya~~A~~~l~~~--------------~~~L--a~~e----  193 (271)
T Consensus       327 iAcia~~yfY~--------~~PE~AlryYRRiLqmG~~sp---eLf~NigLCC~yaqQ~D~~L~sf~RAlstat~~~~aa  395 (478)
T KOG1129         327 IACIAVGYFYD--------NNPEMALRYYRRILQMGAQSP---ELFCNIGLCCLYAQQIDLVLPSFQRALSTATQPGQAA  395 (478)
T ss_pred             EEEEEECCCCC--------CCHHHHHHHHHHHHHHCCCCH---HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHH
T ss_conf             56655300138--------986899999999998327776---7776588898754003031788999986336864156


Q ss_pred             ---HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
Q ss_conf             ---5566666544322345689998865289981159999999999997498799999999997856999
Q gi|254781174|r  194 ---VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG  260 (271)
Q Consensus       194 ---~~ia~~Y~~~~~y~aA~~~~~~~i~~yp~t~~~~eAl~~l~~~y~~lg~~d~A~~~~~~l~~~yP~s  260 (271)
T Consensus       396 DvWYNlg~vaV~iGD~nlA~rcfrlaL~~d~~h~---ealnNLavL~~r~G~i~~Arsll~~A~s~~P~m  462 (478)
T KOG1129         396 DVWYNLGFVAVTIGDFNLAKRCFRLALTSDAQHG---EALNNLAVLAARSGDILGARSLLNAAKSVMPDM  462 (478)
T ss_pred             HHHHCCCEEEEECCCHHHHHHHHHHHHCCCCCHH---HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
T ss_conf             6664001167703424888888898750585238---888768998851276387899998765418530