HHsearch alignment for GI: 254781174 and conserved domain: PRK02603
>PRK02603 photosystem I assembly protein Ycf3; Provisional.
Probab=99.03 E-value=1.5e-08 Score=67.90 Aligned_cols=145 Identities=14% Similarity=0.108 Sum_probs=101.2
Q ss_pred HHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 99809899999999999853047730268998778877654555679999988754011211013555443444555544
Q gi|254781174|r 67 FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146 (271)
Q Consensus 67 ~~~~~~y~~A~~~f~~i~~~~P~s~~a~~A~~~la~~~y~~~~y~~A~~~~~~fi~~~P~s~~~~~A~y~~a~~~~~~~~ 146 (271)
T Consensus 9 nfidk~ftv~ad~~~k~~p~~~~~k~A-~~Yy~~G~~~q~~G~Y~EAle~Y~kAL~Le~dp~D~s~ilyNiGlIY~~~-- 85 (172)
T PRK02603 9 NFIDKSFTVMADLILKILPINKKAKEA-FVYYRDGMSAQNDGDYAEALENYEEALKLEEDPNDRSYILYNMAIIYASN-- 85 (172)
T ss_pred CHHHHHHHHHHHHHHHHHCCCCCHHHH-HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHC--
T ss_conf 114424899999999981588633689-99997225777457999999999998727789620899997799999986--
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 31112345899999999999852001013456555555566666665556666654432234568999886528998
Q gi|254781174|r 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223 (271)
Q Consensus 147 ~~~~d~~~~~~A~~~f~~~i~~yP~S~ya~~A~~~l~~~~~~La~~e~~ia~~Y~~~~~y~aA~~~~~~~i~~yp~t 223 (271)
T Consensus 86 ------G~~~kAie~Y~kALeiNP~~~---~AlNNlgvIY~k~G~~a~~~~~~~~~~~~fdkAa~yw~kAI~l~P~n 153 (172)
T PRK02603 86 ------GEHDKALETYHQALELNPKQP---SALNNIAVIYHKRGRKAEEAGDQDEAEAWFDKAAEYWKQAIRLAPNN 153 (172)
T ss_pred ------CCHHHHHHHHHHHHHHCCCCH---HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf ------998899999999998689978---99999999999985999984587789999999999999988509987