HHsearch alignment for GI: 254781174 and conserved domain: PRK02603

>PRK02603 photosystem I assembly protein Ycf3; Provisional.
Probab=99.03  E-value=1.5e-08  Score=67.90  Aligned_cols=145  Identities=14%  Similarity=0.108  Sum_probs=101.2

Q ss_pred             HHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             99809899999999999853047730268998778877654555679999988754011211013555443444555544
Q gi|254781174|r   67 FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR  146 (271)
Q Consensus        67 ~~~~~~y~~A~~~f~~i~~~~P~s~~a~~A~~~la~~~y~~~~y~~A~~~~~~fi~~~P~s~~~~~A~y~~a~~~~~~~~  146 (271)
T Consensus         9 nfidk~ftv~ad~~~k~~p~~~~~k~A-~~Yy~~G~~~q~~G~Y~EAle~Y~kAL~Le~dp~D~s~ilyNiGlIY~~~--   85 (172)
T PRK02603          9 NFIDKSFTVMADLILKILPINKKAKEA-FVYYRDGMSAQNDGDYAEALENYEEALKLEEDPNDRSYILYNMAIIYASN--   85 (172)
T ss_pred             CHHHHHHHHHHHHHHHHHCCCCCHHHH-HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHC--
T ss_conf             114424899999999981588633689-99997225777457999999999998727789620899997799999986--


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             31112345899999999999852001013456555555566666665556666654432234568999886528998
Q gi|254781174|r  147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA  223 (271)
Q Consensus       147 ~~~~d~~~~~~A~~~f~~~i~~yP~S~ya~~A~~~l~~~~~~La~~e~~ia~~Y~~~~~y~aA~~~~~~~i~~yp~t  223 (271)
T Consensus        86 ------G~~~kAie~Y~kALeiNP~~~---~AlNNlgvIY~k~G~~a~~~~~~~~~~~~fdkAa~yw~kAI~l~P~n  153 (172)
T PRK02603         86 ------GEHDKALETYHQALELNPKQP---SALNNIAVIYHKRGRKAEEAGDQDEAEAWFDKAAEYWKQAIRLAPNN  153 (172)
T ss_pred             ------CCHHHHHHHHHHHHHHCCCCH---HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             ------998899999999998689978---99999999999985999984587789999999999999988509987