HHsearch alignment for GI: 254781174 and conserved domain: PRK10049
>PRK10049 pgaA outer membrane protein PgaA; Provisional.
Probab=98.68 E-value=1.5e-05 Score=50.36 Aligned_cols=75 Identities=13% Similarity=0.216 Sum_probs=53.1
Q ss_pred CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC-------------------------------CCHHHHHHHHHHHH
Q ss_conf 68999999999998098999999999998530477-------------------------------30268998778877
Q gi|254781174|r 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA-------------------------------GVARKSLLMSAFVQ 104 (271)
Q Consensus 56 ~~~~lY~~a~~~~~~~~y~~A~~~f~~i~~~~P~s-------------------------------~~a~~A~~~la~~~ 104 (271)
T Consensus 30 ~~d~~yd~~Ii~AR~G~~~~al~~L~~~~~~~~~~~~~v~D~l~i~sWag~d~~v~~~~~~~~~~~~lp~~~l~~~Aka~ 109 (818)
T PRK10049 30 AADTAYDALIIEARAGDTAPALSWLQQKSKAGALSNGQVADWLQIALWAGQDQEVITVYERYQSHMQLPARGLAAAARAY 109 (818)
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHH
T ss_conf 32568999999986488236899999875338766788988999985347777999999961888889979999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCHH
Q ss_conf 65455567999998875401121101
Q gi|254781174|r 105 YSAGKYQQAASLGEEYITQYPESKNV 130 (271)
Q Consensus 105 y~~~~y~~A~~~~~~fi~~~P~s~~~ 130 (271)
T Consensus 110 Rn~kq~~~Al~ly~~~~~~~P~n~d~ 135 (818)
T PRK10049 110 RNLKQWQNSLTLWQKALSLEPQNKDY 135 (818)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCH
T ss_conf 63554677999999985029999407