HHsearch alignment for GI: 254781174 and conserved domain: TIGR03042

>TIGR03042 PS_II_psbQ_bact photosystem II protein PsbQ. This protein through the member sll1638 from Synechocystis sp. PCC 6803, was shown to be part of the cyanobacteria photosystem II. It is homologous to (but quite diverged from) the chloroplast PsbQ protein, called oxygen-evolving enhancer protein 3 (OEE3). We designate this cyanobacteria protein PsbQ by homology.

Probab=92.12  E-value=0.71  Score=23.19  Aligned_cols=23  Identities=13%  Similarity=0.330  Sum_probs=15.3

Q ss_pred             HHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf             99999999999999972268753
Q gi|254781174|r   21 KFALTIFFSIAVCFLVGWERQSS   43 (271)
Q Consensus        21 k~~~~i~~~i~~~~l~~Cs~~~~   43 (271)
T Consensus         2 Rsi~s~~L~~~~~fLvsC~gp~a   24 (142)
T TIGR03042         2 RSLASLLLVLLLTFLVSCSGPAA   24 (142)
T ss_pred             HHHHHHHHHHHHHHHHHCCCCCC
T ss_conf             76999999999999988389988