HHsearch alignment for GI: 254781174 and conserved domain: smart00028
>smart00028 TPR Tetratricopeptide repeats. Repeats present in 4 or more copies in proteins. Contain a minimum of 34 amino acids each and self-associate via a "knobs and holes" mechanism.
Probab=94.00 E-value=0.054 Score=29.69 Aligned_cols=32 Identities=19% Similarity=0.221 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 89987788776545556799999887540112
Q gi|254781174|r 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126 (271)
Q Consensus 95 ~A~~~la~~~y~~~~y~~A~~~~~~fi~~~P~ 126 (271)
T Consensus 2 ~~~~~lg~~y~~~~~~~~Ai~~~~~al~~~p~ 33 (34)
T smart00028 2 EALYNLGNAYLKLGDYDEALEYYEKALELDPN 33 (34)
T ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCC
T ss_conf 28999899999823699999999997735999