HHsearch results for GI: 254781174 and protein with PDBid: 1fch_A

>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 2c0m_A 2c0l_A
Probab=99.67  E-value=3e-14  Score=99.88  Aligned_cols=200  Identities=11%  Similarity=-0.028  Sum_probs=142.7

Q ss_pred             CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
Q ss_conf             36899999999999809899999999999853047730268998778877654555679999988754011211013555
Q gi|254781174|r   55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY  134 (271)
Q Consensus        55 ~~~~~lY~~a~~~~~~~~y~~A~~~f~~i~~~~P~s~~a~~A~~~la~~~y~~~~y~~A~~~~~~fi~~~P~s~~~~~A~  134 (271)
                      ..+..++..|..+.+.|++++|+..|++++...|..   ..+.+.+|.++..+|++++|+..+++.+...|....+....
T Consensus        96 ~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~---~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~  172 (368)
T 1fch_A           96 KHMEAWQYLGTTQAENEQELLAISALRRCLELKPDN---QTALMALAVSFTNESLQRQACEILRDWLRYTPAYAHLVTPA  172 (368)
T ss_dssp             TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSTTTGGGCC--
T ss_pred             CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCC---HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHH
T ss_conf             989999999999998799999999999998719998---99999999999983884102368889998681069998778


Q ss_pred             H----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH--------------------HHHHHH
Q ss_conf             4----4344455554431112345899999999999852001013456555555--------------------566666
Q gi|254781174|r  135 Y----LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV--------------------GRNQLA  190 (271)
Q Consensus       135 y----~~a~~~~~~~~~~~~d~~~~~~A~~~f~~~i~~yP~S~ya~~A~~~l~~--------------------~~~~La  190 (271)
                      .    ..++.............+...+|+..|...+...|++.-+ .+...+..                    +....+
T Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~ea~~~~~~a~~~~~~~~~~-~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~  251 (368)
T 1fch_A          173 EEGAGGAGLGPSKRILGSLLSDSLFLEVKELFLAAVRLDPTSIDP-DVQCGLGVLFNLSGEYDKAVDCFTAALSVRPNDY  251 (368)
T ss_dssp             -------------CTTHHHHHHHHHHHHHHHHHHHHHHSTTSCCH-HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHH-HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCH
T ss_conf             777777777899999999987413999999999999848542014-7777799999882447779998999998699979


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCH
Q ss_conf             66555666665443223456899988652899811599999999999974987999999999978569997
Q gi|254781174|r  191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY  261 (271)
Q Consensus       191 ~~e~~ia~~Y~~~~~y~aA~~~~~~~i~~yp~t~~~~eAl~~l~~~y~~lg~~d~A~~~~~~l~~~yP~s~  261 (271)
                      .--+.+|..|...|++..|+..|+..++..|+.+   ++++.+|.+|..+|..++|.+.++....-.|++.
T Consensus       252 ~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~---~a~~~lg~~~~~~g~~~~A~~~~~~Al~l~p~~~  319 (368)
T 1fch_A          252 LLWNKLGATLANGNQSEEAVAAYRRALELQPGYI---RSRYNLGISCINLGAHREAVEHFLEALNMQRKSR  319 (368)
T ss_dssp             HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTC-
T ss_pred             HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCH---HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCH
T ss_conf             9999999999987899999999999997499989---9999999999986999999999999987198683