HHsearch results for GI: 254781174 and protein with PDBid: 1hz4_A
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transcription activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=99.34 E-value=5.9e-10 Score=74.85 Aligned_cols=196 Identities=12% Similarity=0.028 Sum_probs=108.3
Q ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH-----
Q ss_conf 999999999998098999999999998530477---302689987788776545556799999887540112110-----
Q gi|254781174|r 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA---GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN----- 129 (271)
Q Consensus 58 ~~lY~~a~~~~~~~~y~~A~~~f~~i~~~~P~s---~~a~~A~~~la~~~y~~~~y~~A~~~~~~fi~~~P~s~~----- 129 (271)
..+...|..++..|++++|+..|+++....|.. .....+...+|.++...|++++|+..+++.+...|....
T Consensus 54 ~a~~~lg~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~ 133 (373)
T 1hz4_A 54 VATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPM 133 (373)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHH
T ss_conf 99999999999879999999999999997475368799999999999999981548999999999999978604666769
Q ss_pred HHHHHHHHHHHHHHHH-------------------------------HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
Q ss_conf 1355544344455554-------------------------------431112345899999999999852001013456
Q gi|254781174|r 130 VDYVYYLVGMSYAQMI-------------------------------RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 (271)
Q Consensus 130 ~~~A~y~~a~~~~~~~-------------------------------~~~~~d~~~~~~A~~~f~~~i~~yP~S~ya~~A 178 (271)
...++..+|.+++.+. .......+...+|...+...+...+.++.....
T Consensus 134 ~a~~~~~la~~~~~~g~~~~a~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~ 213 (373)
T 1hz4_A 134 HEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQLQCLAMLIQCSLARGDLDNARSQLNRLENLLGNGKYHSDW 213 (373)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGGGHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCCCHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHH
T ss_conf 99999999999998799899999999977765400017899999987899997244799999999999998757753247
Q ss_pred HHHHHHH----------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---CCCCHHHH
Q ss_conf 5555555----------------------------6666666555666665443223456899988652---89981159
Q gi|254781174|r 179 RFYVTVG----------------------------RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN---YSDAEHAE 227 (271)
Q Consensus 179 ~~~l~~~----------------------------~~~La~~e~~ia~~Y~~~~~y~aA~~~~~~~i~~---yp~t~~~~ 227 (271)
...+... ..........+|+.|...|++..|+..+..++.. .++.+...
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~ 293 (373)
T 1hz4_A 214 ISNANKVRVIYWQMTGDKAAAANWLRHTAKPEFANNHFLQGQWRNIARAQILLGEFEPAEIVLEELNENARSLRLMSDLN 293 (373)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHSCCCCCTTCGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHH
T ss_conf 99999999999986032899999999998764136846799999999999983462889999999999998758966899
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHH
Q ss_conf 99999999999749879999999999
Q gi|254781174|r 228 EAMARLVEAYVALALMDEAREVVSLI 253 (271)
Q Consensus 228 eAl~~l~~~y~~lg~~d~A~~~~~~l 253 (271)
+++..++.+|..+|..++|...++..
T Consensus 294 ~~~~~la~~~~~~g~~~~A~~~l~~A 319 (373)
T 1hz4_A 294 RNLLLLNQLYWQAGRKSDAQRVLLDA 319 (373)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHH
T ss_conf 99999999999879999999999999